Difference between revisions of "TSS:Hg 103628.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=2 |entrez_id=1109 |gc_percent=0.467662 |gene_alias=3-alpha-HSD|C11|CDR|CHDR|DD-4|DD4|HAKRA |gene_description=aldo-keto reductase...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C11= | ||
| + | |CDR= | ||
| + | |CHDR= | ||
| + | |DD-4= | ||
| + | |DD4= | ||
| + | |HAKRA= | ||
| + | |all_trans=ENST00000263126.2:0 NM_001818:0 uc001ihw.2:0 BC020744:0 S68287:17 CU676682:24 DQ894598:24 AB031085:24 DQ891424:24 AB045829:24 KJ896595:24 KR711253:24 M33375:27 D26125:28 AK314988:-37 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=0 | ||
|distance_to_tss=2 | |distance_to_tss=2 | ||
| + | |end=5196844 | ||
|entrez_id=1109 | |entrez_id=1109 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
|gene_alias=3-alpha-HSD|C11|CDR|CHDR|DD-4|DD4|HAKRA | |gene_alias=3-alpha-HSD|C11|CDR|CHDR|DD-4|DD4|HAKRA | ||
|gene_description=aldo-keto reductase family 1 member C4 | |gene_description=aldo-keto reductase family 1 member C4 | ||
| − | |gene_name=AKR1C4 | + | |gene_id=1109 |
| + | |gene_name="aldo-keto reductase family 1, member C4" | ||
| + | |gene_source=HGNC:387 | ||
| + | |gene_symbol=AKR1C4 | ||
| + | |gene_synonyms=3-alpha-HSD C11 CDR DD4 HAKRA MGC22581 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:387 | ||
|nearest_ensembl=ENSG00000198610 | |nearest_ensembl=ENSG00000198610 | ||
|nearest_promoter_id=NM_001818 | |nearest_promoter_id=NM_001818 | ||
|nearest_refseq=NM_001818 | |nearest_refseq=NM_001818 | ||
|nearest_unigene=Hs.567245 | |nearest_unigene=Hs.567245 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=5196830 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000263126.2 NM_001818 uc001ihw.2 BC020744 | ||
| + | |tss_classification=no | ||
|tss_id=hg_103628.1 | |tss_id=hg_103628.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P17516 | ||
}} | }} | ||
Revision as of 20:17, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000263126.2 NM_001818 uc001ihw.2 BC020744 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENST00000263126.2:0 NM_001818:0 uc001ihw.2:0 BC020744:0 S68287:17 CU676682:24 DQ894598:24 AB031085:24 DQ891424:24 AB045829:24 KJ896595:24 KR711253:24 M33375:27 D26125:28 AK314988:-37 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001818 |
| Entrez ID: | 1109 |
| Nearest Unigene: | Hs.567245 |
| Nearest Refseq: | NM_001818 |
| Nearest Ensembl: | ENSG00000198610 |
| Gene Name: | "aldo-keto reductase family 1, member C4" |
| Gene Alias: | 3-alpha-HSD |
| Gene Description: | aldo-keto reductase family 1 member C4 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
