Difference between revisions of "TSS:Hg 103641.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=-92 |entrez_id=10276 |gc_percent=0.517413 |gene_alias=ARHGEF8|NET1A |gene_description=neuroepithelial cell transforming 1 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NET1A= | ||
| + | |all_trans=NM_005863:86 NR_073040:86 ENST00000486354.1:144 ENST00000449083.5:144 uc057rjj.1:144 uc057rjk.1:144 AK315566:144 AK294244:144 AK304028:144 ENST00000380359.3:146 uc001iib.5:146 AK024919:146 AJ010046:153 BC010285:155 CU679671:299 KJ898188:299 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=86 | ||
|distance_to_tss=-92 | |distance_to_tss=-92 | ||
| + | |end=5446465 | ||
|entrez_id=10276 | |entrez_id=10276 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
|gene_alias=ARHGEF8|NET1A | |gene_alias=ARHGEF8|NET1A | ||
|gene_description=neuroepithelial cell transforming 1 | |gene_description=neuroepithelial cell transforming 1 | ||
| − | |gene_name=NET1 | + | |gene_id=10276 |
| + | |gene_name=neuroepithelial cell transforming 1 | ||
| + | |gene_source=HGNC:14592 | ||
| + | |gene_symbol=NET1 | ||
| + | |gene_synonyms=ARHGEF8 NET1A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:14592 | ||
|nearest_ensembl=ENSG00000173848 | |nearest_ensembl=ENSG00000173848 | ||
|nearest_promoter_id=NM_005863 | |nearest_promoter_id=NM_005863 | ||
|nearest_refseq=NM_005863 | |nearest_refseq=NM_005863 | ||
|nearest_unigene=Hs.25155 | |nearest_unigene=Hs.25155 | ||
| + | |num_trans=16 | ||
| + | |species=human | ||
| + | |start=5446453 | ||
| + | |strand=+ | ||
| + | |transcript_name=NM_005863 NR_073040 | ||
| + | |tss_classification=no | ||
|tss_id=hg_103641.1 | |tss_id=hg_103641.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q7Z628 | ||
}} | }} | ||
Revision as of 20:18, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_005863 NR_073040 |
|---|---|
| Distance: | 86 |
| Num_trans: | 16 |
| All_trans: | NM_005863:86 NR_073040:86 ENST00000486354.1:144 ENST00000449083.5:144 uc057rjj.1:144 uc057rjk.1:144 AK315566:144 AK294244:144 AK304028:144 ENST00000380359.3:146 uc001iib.5:146 AK024919:146 AJ010046:153 BC010285:155 CU679671:299 KJ898188:299 |
TATA-Box annotation
| Distance to TSS: | -92 |
|---|---|
| Nearest PromoterID: | NM_005863 |
| Entrez ID: | 10276 |
| Nearest Unigene: | Hs.25155 |
| Nearest Refseq: | NM_005863 |
| Nearest Ensembl: | ENSG00000173848 |
| Gene Name: | neuroepithelial cell transforming 1 |
| Gene Alias: | ARHGEF8 |
| Gene Description: | neuroepithelial cell transforming 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
