Difference between revisions of "TSS:Hg 103832.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=40828 |entrez_id=207107 |gc_percent=0.283582 |gene_alias=SFTPF |gene_description="surfactant associated 1, pseudogene" |gene_name=S...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance= | ||
|distance_to_tss=40828 | |distance_to_tss=40828 | ||
| + | |end=10754088 | ||
|entrez_id=207107 | |entrez_id=207107 | ||
|gc_percent=0.283582 | |gc_percent=0.283582 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NR_027082 | |nearest_refseq=NR_027082 | ||
|nearest_unigene=Hs.31562 | |nearest_unigene=Hs.31562 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=10754084 | ||
| + | |strand=+ | ||
|tata_box="7(GACTAGAAAAGC,-,0.00)" | |tata_box="7(GACTAGAAAAGC,-,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103832.1 | |tss_id=hg_103832.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 20:26, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 40828 |
|---|---|
| Nearest PromoterID: | NR_027082 |
| Entrez ID: | 207107 |
| Nearest Unigene: | Hs.31562 |
| Nearest Refseq: | NR_027082 |
| Nearest Ensembl: | ENSG00000225383 |
| Gene Name: | SFTA1P |
| Gene Alias: | SFTPF |
| Gene Description: | "surfactant associated 1, pseudogene" |
| Gene Type: | pseudo |
| CpG%: | 0 |
| GC%: | 0.283582 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "7(GACTAGAAAAGC,-,0.00)" |
