Difference between revisions of "TSS:Hg 103884.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=23483 |entrez_id=414196 |gc_percent=0.472637 |gene_alias=C10orf31 |gene_description=CELF2 antisense RNA 1 |gene_name=CELF2-AS1...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AF086447:-110 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=-110 | ||
|distance_to_tss=23483 | |distance_to_tss=23483 | ||
| + | |end=11321203 | ||
|entrez_id=414196 | |entrez_id=414196 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
|gene_alias=C10orf31 | |gene_alias=C10orf31 | ||
|gene_description=CELF2 antisense RNA 1 | |gene_description=CELF2 antisense RNA 1 | ||
| − | |gene_name=CELF2- | + | |gene_id=10659 |
| + | |gene_name="CUGBP, Elav-like family member 2" | ||
| + | |gene_source=HGNC:2550 | ||
| + | |gene_symbol=CELF2 | ||
| + | |gene_synonyms=BRUNOL3 Etr-3 NAPOR-2 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:2550 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_126062 | |nearest_promoter_id=NR_126062 | ||
|nearest_refseq=NM_001012713 | |nearest_refseq=NM_001012713 | ||
|nearest_unigene=Hs.729598 | |nearest_unigene=Hs.729598 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=11321179 | ||
| + | |strand=+ | ||
| + | |transcript_name=AF086447 | ||
| + | |tss_classification=no | ||
|tss_id=hg_103884.1 | |tss_id=hg_103884.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:28, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AF086447 |
|---|---|
| Distance: | -110 |
| Num_trans: | 1 |
| All_trans: | AF086447:-110 |
TATA-Box annotation
| Distance to TSS: | 23483 |
|---|---|
| Nearest PromoterID: | NR_126062 |
| Entrez ID: | 414196 |
| Nearest Unigene: | Hs.729598 |
| Nearest Refseq: | NM_001012713 |
| Nearest Ensembl: | |
| Gene Name: | "CUGBP, Elav-like family member 2" |
| Gene Alias: | C10orf31 |
| Gene Description: | CELF2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
