Difference between revisions of "TSS:Hg 10389.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=15 |entrez_id=9249 |gc_percent=0.437811 |gene_alias=DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 |gene_description=dehydrogenase/redu...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RDH17= | ||
| + | |Rsdr1= | ||
| + | |SDR1= | ||
| + | |SDR16C1= | ||
| + | |all_trans=ENST00000616661.4:-8 NM_004753:-8 uc031tpa.2:-8 BX648476:-8 AK312961:23 AK309282:27 AY358093:71 AK310202:76 BC002730:246 AK222593:307 AF061741:308 CU678154:360 KJ897985:361 DQ893006:361 DQ896252:361 DQ426869:366 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| + | |distance=-8 | ||
|distance_to_tss=15 | |distance_to_tss=15 | ||
| + | |end=12617723 | ||
|entrez_id=9249 | |entrez_id=9249 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
|gene_alias=DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 | |gene_alias=DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 | ||
|gene_description=dehydrogenase/reductase 3 | |gene_description=dehydrogenase/reductase 3 | ||
| − | |gene_name=DHRS3 | + | |gene_id=9249 |
| + | |gene_name=dehydrogenase/reductase (SDR family) member 3 | ||
| + | |gene_source=HGNC:17693 | ||
| + | |gene_symbol=DHRS3 | ||
| + | |gene_synonyms=RDH17 Rsdr1 SDR1 SDR16C1 retSDR1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17693 | ||
|nearest_ensembl=ENSG00000162496 | |nearest_ensembl=ENSG00000162496 | ||
|nearest_promoter_id=NM_004753 | |nearest_promoter_id=NM_004753 | ||
|nearest_refseq=NM_004753 | |nearest_refseq=NM_004753 | ||
|nearest_unigene=Hs.289347 | |nearest_unigene=Hs.289347 | ||
| + | |num_trans=16 | ||
| + | |retSDR1= | ||
| + | |species=human | ||
| + | |start=12617708 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000616661.4 NM_004753 uc031tpa.2 BX648476 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10389.1 | |tss_id=hg_10389.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O75911 | ||
}} | }} | ||
Revision as of 20:28, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000616661.4 NM_004753 uc031tpa.2 BX648476 |
|---|---|
| Distance: | -8 |
| Num_trans: | 16 |
| All_trans: | ENST00000616661.4:-8 NM_004753:-8 uc031tpa.2:-8 BX648476:-8 AK312961:23 AK309282:27 AY358093:71 AK310202:76 BC002730:246 AK222593:307 AF061741:308 CU678154:360 KJ897985:361 DQ893006:361 DQ896252:361 DQ426869:366 |
TATA-Box annotation
| Distance to TSS: | 15 |
|---|---|
| Nearest PromoterID: | NM_004753 |
| Entrez ID: | 9249 |
| Nearest Unigene: | Hs.289347 |
| Nearest Refseq: | NM_004753 |
| Nearest Ensembl: | ENSG00000162496 |
| Gene Name: | dehydrogenase/reductase (SDR family) member 3 |
| Gene Alias: | DD83.1 |
| Gene Description: | dehydrogenase/reductase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
