Difference between revisions of "TSS:Hg 103898.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=48 |entrez_id=79746 |gc_percent=0.79602 |gene_alias=- |gene_description=enoyl-CoA hydratase domain containing 3 |gene_name=ECHD...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000379215.8:0 ENST00000496136.5:0 ENST00000420401.5:0 uc001ikw.5:0 uc057rrg.1:0 uc057rrh.1:0 AF275677:0 AF289604:0 AK222511:0 AK290902:0 BC009617:0 AK024562:0 NM_024693:-5 KJ899561:128 BC001091:178 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=0 | ||
|distance_to_tss=48 | |distance_to_tss=48 | ||
| + | |end=11742449 | ||
|entrez_id=79746 | |entrez_id=79746 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=enoyl-CoA hydratase domain containing 3 | |gene_description=enoyl-CoA hydratase domain containing 3 | ||
| − | |gene_name=ECHDC3 | + | |gene_id=79746 |
| + | |gene_name=enoyl-CoA hydratase domain containing 3 | ||
| + | |gene_source=HGNC:23489 | ||
| + | |gene_symbol=ECHDC3 | ||
| + | |gene_synonyms=FLJ20909 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23489 | ||
|nearest_ensembl=ENSG00000134463 | |nearest_ensembl=ENSG00000134463 | ||
|nearest_promoter_id=NM_024693 | |nearest_promoter_id=NM_024693 | ||
|nearest_refseq=NM_024693 | |nearest_refseq=NM_024693 | ||
|nearest_unigene=Hs.22242 | |nearest_unigene=Hs.22242 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=11742361 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000379215.8 ENST00000496136.5 ENST00000420401.5 uc001ikw.5 uc057rrg.1 uc057rrh.1 AF275677 AF289604 AK222511 AK290902 BC009617 AK024562 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103898.1 | |tss_id=hg_103898.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5W0J8 Q96DC8 | ||
}} | }} | ||
Revision as of 20:29, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000379215.8 ENST00000496136.5 ENST00000420401.5 uc001ikw.5 uc057rrg.1 uc057rrh.1 AF275677 AF289604 AK222511 AK290902 BC009617 AK024562 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENST00000379215.8:0 ENST00000496136.5:0 ENST00000420401.5:0 uc001ikw.5:0 uc057rrg.1:0 uc057rrh.1:0 AF275677:0 AF289604:0 AK222511:0 AK290902:0 BC009617:0 AK024562:0 NM_024693:-5 KJ899561:128 BC001091:178 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NM_024693 |
| Entrez ID: | 79746 |
| Nearest Unigene: | Hs.22242 |
| Nearest Refseq: | NM_024693 |
| Nearest Ensembl: | ENSG00000134463 |
| Gene Name: | enoyl-CoA hydratase domain containing 3 |
| Gene Alias: | - |
| Gene Description: | enoyl-CoA hydratase domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
