Difference between revisions of "TSS:Hg 103901.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=136 |entrez_id=79746 |gc_percent=0.741294 |gene_alias=- |gene_description=enoyl-CoA hydratase domain containing 3 |gene_name=EC...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000420401.5:-43 uc057rrh.1:-43 AK024562:-45 BC009617:-54 AK290902:-60 AK222511:-71 KJ899561:80 AF289604:-88 AF275677:-105 ENST00000379215.8:-123 ENST00000496136.5:-123 uc001ikw.5:-123 uc057rrg.1:-123 BC001091:130 NM_024693:-132 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=-43 | ||
|distance_to_tss=136 | |distance_to_tss=136 | ||
| + | |end=11742497 | ||
|entrez_id=79746 | |entrez_id=79746 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=enoyl-CoA hydratase domain containing 3 | |gene_description=enoyl-CoA hydratase domain containing 3 | ||
| − | |gene_name=ECHDC3 | + | |gene_id=79746 |
| + | |gene_name=enoyl-CoA hydratase domain containing 3 | ||
| + | |gene_source=HGNC:23489 | ||
| + | |gene_symbol=ECHDC3 | ||
| + | |gene_synonyms=FLJ20909 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23489 | ||
|nearest_ensembl=ENSG00000134463 | |nearest_ensembl=ENSG00000134463 | ||
|nearest_promoter_id=NM_024693 | |nearest_promoter_id=NM_024693 | ||
|nearest_refseq=NM_024693 | |nearest_refseq=NM_024693 | ||
|nearest_unigene=Hs.22242 | |nearest_unigene=Hs.22242 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=11742488 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000420401.5 uc057rrh.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103901.1 | |tss_id=hg_103901.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5W0J8 | ||
}} | }} | ||
Revision as of 20:29, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000420401.5 uc057rrh.1 |
|---|---|
| Distance: | -43 |
| Num_trans: | 15 |
| All_trans: | ENST00000420401.5:-43 uc057rrh.1:-43 AK024562:-45 BC009617:-54 AK290902:-60 AK222511:-71 KJ899561:80 AF289604:-88 AF275677:-105 ENST00000379215.8:-123 ENST00000496136.5:-123 uc001ikw.5:-123 uc057rrg.1:-123 BC001091:130 NM_024693:-132 |
TATA-Box annotation
| Distance to TSS: | 136 |
|---|---|
| Nearest PromoterID: | NM_024693 |
| Entrez ID: | 79746 |
| Nearest Unigene: | Hs.22242 |
| Nearest Refseq: | NM_024693 |
| Nearest Ensembl: | ENSG00000134463 |
| Gene Name: | enoyl-CoA hydratase domain containing 3 |
| Gene Alias: | - |
| Gene Description: | enoyl-CoA hydratase domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
