Difference between revisions of "TSS:Hg 103941.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=17382 |entrez_id=10133 |gc_percent=0.467662 |gene_alias=ALS12|FIP2|GLC1E|HIP7|HYPL|NRP|TFIIIA-INTP |gene_description=optineurin...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FIP2= | ||
| + | |GLC1E= | ||
| + | |HIP7= | ||
| + | |HYPL= | ||
| + | |NRP= | ||
| + | |TFIIIA-INTP= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance= | ||
|distance_to_tss=17382 | |distance_to_tss=17382 | ||
| + | |end=13117465 | ||
|entrez_id=10133 | |entrez_id=10133 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| Line 12: | Line 21: | ||
|nearest_refseq=NM_021980 | |nearest_refseq=NM_021980 | ||
|nearest_unigene=Hs.332706 | |nearest_unigene=Hs.332706 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=13117462 | ||
| + | |strand=+ | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_103941.1 | |tss_id=hg_103941.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 20:31, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 17382 |
|---|---|
| Nearest PromoterID: | NM_001008211 |
| Entrez ID: | 10133 |
| Nearest Unigene: | Hs.332706 |
| Nearest Refseq: | NM_021980 |
| Nearest Ensembl: | ENSG00000123240 |
| Gene Name: | OPTN |
| Gene Alias: | ALS12 |
| Gene Description: | optineurin |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
