Difference between revisions of "TSS:Hg 103987.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=17 |entrez_id=79723 |gc_percent=0.741294 |gene_alias=KMT1B |gene_description=suppressor of variegation 3-9 homolog 2 |gene_name...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_001193426:-12 NM_001193424:-12 NR_034181:-12 ENST00000378331.5:14 uc057ryo.1:14 ENST00000433779.5:42 uc057ryp.1:42 ENST00000378325.7:57 uc001ing.4:57 BC029360:57 NM_001193427:60 NM_001193425:60 AK222565:70 AK225369:78 AK027067:80 ENST00000354919.10:83 uc021png.2:83 CU688630:83 KJ894721:83 ENST00000313519.9:94 NM_024670:94 uc001inj.4:94 BC007754:94 ENST00000420416.1:116 uc057ryq.1:116 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=-12 | ||
|distance_to_tss=17 | |distance_to_tss=17 | ||
| + | |end=14878806 | ||
|entrez_id=79723 | |entrez_id=79723 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
|gene_alias=KMT1B | |gene_alias=KMT1B | ||
|gene_description=suppressor of variegation 3-9 homolog 2 | |gene_description=suppressor of variegation 3-9 homolog 2 | ||
| − | |gene_name=SUV39H2 | + | |gene_id=79723 |
| + | |gene_name=suppressor of variegation 3-9 homolog 2 | ||
| + | |gene_source=HGNC:17287 | ||
| + | |gene_symbol=SUV39H2 | ||
| + | |gene_synonyms=FLJ23414 KMT1B | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17287 | ||
|nearest_ensembl=ENSG00000152455 | |nearest_ensembl=ENSG00000152455 | ||
|nearest_promoter_id=NR_034181 | |nearest_promoter_id=NR_034181 | ||
|nearest_refseq=NM_024670 | |nearest_refseq=NM_024670 | ||
|nearest_unigene=Hs.554883 | |nearest_unigene=Hs.554883 | ||
| + | |num_trans=25 | ||
| + | |species=human | ||
| + | |start=14878794 | ||
| + | |strand=+ | ||
| + | |transcript_name=NM_001193426 NM_001193424 NR_034181 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103987.1 | |tss_id=hg_103987.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9H5I1 | ||
}} | }} | ||
Revision as of 20:33, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001193426 NM_001193424 NR_034181 |
|---|---|
| Distance: | -12 |
| Num_trans: | 25 |
| All_trans: | NM_001193426:-12 NM_001193424:-12 NR_034181:-12 ENST00000378331.5:14 uc057ryo.1:14 ENST00000433779.5:42 uc057ryp.1:42 ENST00000378325.7:57 uc001ing.4:57 BC029360:57 NM_001193427:60 NM_001193425:60 AK222565:70 AK225369:78 AK027067:80 ENST00000354919.10:83 uc021png.2:83 CU688630:83 KJ894721:83 ENST00000313519.9:94 NM_024670:94 uc001inj.4:94 BC007754:94 ENST00000420416.1:116 uc057ryq.1:116 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NR_034181 |
| Entrez ID: | 79723 |
| Nearest Unigene: | Hs.554883 |
| Nearest Refseq: | NM_024670 |
| Nearest Ensembl: | ENSG00000152455 |
| Gene Name: | suppressor of variegation 3-9 homolog 2 |
| Gene Alias: | KMT1B |
| Gene Description: | suppressor of variegation 3-9 homolog 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
