Difference between revisions of "TSS:Hg 104106.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=-11 |entrez_id=221074 |gc_percent=0.378109 |gene_alias=LZT-Hs8|ZIP-12|bA570F3.1 |gene_description=solute carrier family 39 member 1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ZIP-12= | ||
| + | |all_trans=ENST00000539911.5:8 ENST00000377369.6:8 NM_001145195:8 NM_001282734:8 NM_001282733:8 NM_152725:8 uc001ipo.2:8 uc010qck.1:8 ENST00000377374.8:61 uc001ipn.3:61 AK055061:61 ENST00000377371.3:83 uc001ipp.3:83 BC035118:83 BC047635:96 AK295294:132 BC094700:132 | ||
| + | |bA570F3.1= | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=8 | ||
|distance_to_tss=-11 | |distance_to_tss=-11 | ||
| + | |end=17951831 | ||
|entrez_id=221074 | |entrez_id=221074 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
|gene_alias=LZT-Hs8|ZIP-12|bA570F3.1 | |gene_alias=LZT-Hs8|ZIP-12|bA570F3.1 | ||
|gene_description=solute carrier family 39 member 12 | |gene_description=solute carrier family 39 member 12 | ||
| − | |gene_name=SLC39A12 | + | |gene_id=221074 |
| + | |gene_name=solute carrier family 39 member 12 | ||
| + | |gene_source=HGNC:20860 | ||
| + | |gene_symbol=SLC39A12 | ||
| + | |gene_synonyms=FLJ30499 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:20860 | ||
|nearest_ensembl=ENSG00000148482 | |nearest_ensembl=ENSG00000148482 | ||
|nearest_promoter_id=NM_001145195 | |nearest_promoter_id=NM_001145195 | ||
|nearest_refseq=NM_152725 | |nearest_refseq=NM_152725 | ||
|nearest_unigene=Hs.350895 | |nearest_unigene=Hs.350895 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=17951824 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000539911.5 ENST00000377369.6 NM_001145195 NM_001282734 NM_001282733 NM_152725 uc001ipo.2 uc010qck.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104106.1 | |tss_id=hg_104106.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=F5GX72 Q504Y0 | ||
}} | }} | ||
Revision as of 20:38, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000539911.5 ENST00000377369.6 NM_001145195 NM_001282734 NM_001282733 NM_152725 uc001ipo.2 uc010qck.1 |
|---|---|
| Distance: | 8 |
| Num_trans: | 17 |
| All_trans: | ENST00000539911.5:8 ENST00000377369.6:8 NM_001145195:8 NM_001282734:8 NM_001282733:8 NM_152725:8 uc001ipo.2:8 uc010qck.1:8 ENST00000377374.8:61 uc001ipn.3:61 AK055061:61 ENST00000377371.3:83 uc001ipp.3:83 BC035118:83 BC047635:96 AK295294:132 BC094700:132 |
TATA-Box annotation
| Distance to TSS: | -11 |
|---|---|
| Nearest PromoterID: | NM_001145195 |
| Entrez ID: | 221074 |
| Nearest Unigene: | Hs.350895 |
| Nearest Refseq: | NM_152725 |
| Nearest Ensembl: | ENSG00000148482 |
| Gene Name: | solute carrier family 39 member 12 |
| Gene Alias: | LZT-Hs8 |
| Gene Description: | solute carrier family 39 member 12 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
