Difference between revisions of "TSS:Hg 104148.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=151 |entrez_id=221079 |gc_percent=0.746269 |gene_alias=ARL8 |gene_description=ADP ribosylation factor like GTPase 5B |gene_name...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AF494061:-64 DQ896464:94 DQ893166:94 AK027275:-95 ENST00000377275.3:-121 uc001iqd.2:-121 BC024163:-121 NM_178815:-142 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=-64 | ||
|distance_to_tss=151 | |distance_to_tss=151 | ||
| + | |end=18659544 | ||
|entrez_id=221079 | |entrez_id=221079 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
|gene_alias=ARL8 | |gene_alias=ARL8 | ||
|gene_description=ADP ribosylation factor like GTPase 5B | |gene_description=ADP ribosylation factor like GTPase 5B | ||
| − | |gene_name=ARL5B | + | |gene_id=221079 |
| + | |gene_name=ADP ribosylation factor like GTPase 5B | ||
| + | |gene_source=HGNC:23052 | ||
| + | |gene_symbol=ARL5B | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23052 | ||
|nearest_ensembl=ENSG00000165997 | |nearest_ensembl=ENSG00000165997 | ||
|nearest_promoter_id=NM_178815 | |nearest_promoter_id=NM_178815 | ||
|nearest_refseq=NM_178815 | |nearest_refseq=NM_178815 | ||
|nearest_unigene=Hs.25362 | |nearest_unigene=Hs.25362 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=18659525 | ||
| + | |strand=+ | ||
| + | |transcript_name=AF494061 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104148.1 | |tss_id=hg_104148.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:40, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF494061 |
|---|---|
| Distance: | -64 |
| Num_trans: | 8 |
| All_trans: | AF494061:-64 DQ896464:94 DQ893166:94 AK027275:-95 ENST00000377275.3:-121 uc001iqd.2:-121 BC024163:-121 NM_178815:-142 |
TATA-Box annotation
| Distance to TSS: | 151 |
|---|---|
| Nearest PromoterID: | NM_178815 |
| Entrez ID: | 221079 |
| Nearest Unigene: | Hs.25362 |
| Nearest Refseq: | NM_178815 |
| Nearest Ensembl: | ENSG00000165997 |
| Gene Name: | ADP ribosylation factor like GTPase 5B |
| Gene Alias: | ARL8 |
| Gene Description: | ADP ribosylation factor like GTPase 5B |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
