Difference between revisions of "TSS:Hg 104152.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=31 |entrez_id=340895 |gc_percent=0.328358 |gene_alias=C10orf112|DIET1|bA265G8.2 |gene_description=MAM and LDL receptor class A...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DIET1= | ||
| + | |all_trans=ENST00000454679.6:-19 NM_001142308:-19 uc031vyw.1:-19 KC843478:-19 | ||
| + | |bA265G8.2= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=-19 | ||
|distance_to_tss=31 | |distance_to_tss=31 | ||
| + | |end=19048815 | ||
|entrez_id=340895 | |entrez_id=340895 | ||
|gc_percent=0.328358 | |gc_percent=0.328358 | ||
|gene_alias=C10orf112|DIET1|bA265G8.2 | |gene_alias=C10orf112|DIET1|bA265G8.2 | ||
|gene_description=MAM and LDL receptor class A domain containing 1 | |gene_description=MAM and LDL receptor class A domain containing 1 | ||
| − | |gene_name=MALRD1 | + | |gene_id=340895 |
| + | |gene_name=MAM and LDL receptor class A domain containing 1 | ||
| + | |gene_source=HGNC:24331 | ||
| + | |gene_symbol=MALRD1 | ||
| + | |gene_synonyms=Diet1 bA265G8.2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:24331 | ||
|nearest_ensembl=ENSG00000204740 | |nearest_ensembl=ENSG00000204740 | ||
|nearest_promoter_id=NM_001142308 | |nearest_promoter_id=NM_001142308 | ||
|nearest_refseq=NM_001142308 | |nearest_refseq=NM_001142308 | ||
|nearest_unigene=Hs.646734 | |nearest_unigene=Hs.646734 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=19048789 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000454679.6 NM_001142308 uc031vyw.1 KC843478 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104152.1 | |tss_id=hg_104152.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5VYJ5 R9WAE9 | ||
}} | }} | ||
Revision as of 20:40, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000454679.6 NM_001142308 uc031vyw.1 KC843478 |
|---|---|
| Distance: | -19 |
| Num_trans: | 4 |
| All_trans: | ENST00000454679.6:-19 NM_001142308:-19 uc031vyw.1:-19 KC843478:-19 |
TATA-Box annotation
| Distance to TSS: | 31 |
|---|---|
| Nearest PromoterID: | NM_001142308 |
| Entrez ID: | 340895 |
| Nearest Unigene: | Hs.646734 |
| Nearest Refseq: | NM_001142308 |
| Nearest Ensembl: | ENSG00000204740 |
| Gene Name: | MAM and LDL receptor class A domain containing 1 |
| Gene Alias: | C10orf112 |
| Gene Description: | MAM and LDL receptor class A domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.328358 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
