Difference between revisions of "TSS:Hg 104156.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=160769 |entrez_id=340895 |gc_percent=0.472637 |gene_alias=C10orf112|DIET1|bA265G8.2 |gene_description=MAM and LDL receptor clas...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |DIET1= | ||
| + | |bA265G8.2= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance= | ||
|distance_to_tss=160769 | |distance_to_tss=160769 | ||
| + | |end=19209553 | ||
|entrez_id=340895 | |entrez_id=340895 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_001142308 | |nearest_refseq=NM_001142308 | ||
|nearest_unigene=Hs.646734 | |nearest_unigene=Hs.646734 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=19209526 | ||
| + | |strand=+ | ||
|tata_box="-90(GCTTTTCAAGAC,+,0.00),7(GCATTTATAGGT,+,0.00)" | |tata_box="-90(GCTTTTCAAGAC,+,0.00),7(GCATTTATAGGT,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104156.1 | |tss_id=hg_104156.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 20:40, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 160769 |
|---|---|
| Nearest PromoterID: | NM_001142308 |
| Entrez ID: | 340895 |
| Nearest Unigene: | Hs.646734 |
| Nearest Refseq: | NM_001142308 |
| Nearest Ensembl: | ENSG00000204740 |
| Gene Name: | MALRD1 |
| Gene Alias: | C10orf112 |
| Gene Description: | MAM and LDL receptor class A domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-90(GCTTTTCAAGAC,+,0.00),7(GCATTTATAGGT,+,0.00)" |
