Difference between revisions of "TSS:Hg 104161.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=239473 |entrez_id=101928834 |gc_percent=0.656716 |gene_alias=- |gene_description=uncharacterized LOC101928834 |gene_name=LOC1019...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000377265.3:0 uc057scw.1:0 AK297683:0 ENST00000411849.1:2 ENST00000492202.1:-461 uc057scv.1:-461 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| + | |distance=0 | ||
|distance_to_tss=239473 | |distance_to_tss=239473 | ||
| + | |end=19489099 | ||
|entrez_id=101928834 | |entrez_id=101928834 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC101928834 | |gene_description=uncharacterized LOC101928834 | ||
| − | |gene_name= | + | |gene_id=340895 |
| + | |gene_name=MAM and LDL receptor class A domain containing 1 | ||
| + | |gene_source=HGNC:24331 | ||
| + | |gene_symbol=MALRD1 | ||
| + | |gene_synonyms=Diet1 bA265G8.2 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:24331 | ||
|nearest_ensembl=ENSG00000233968 | |nearest_ensembl=ENSG00000233968 | ||
|nearest_promoter_id=NR_120646 | |nearest_promoter_id=NR_120646 | ||
|nearest_refseq=NR_120646 | |nearest_refseq=NR_120646 | ||
|nearest_unigene=Hs.676482 | |nearest_unigene=Hs.676482 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=19489055 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000377265.3 uc057scw.1 AK297683 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104161.1 | |tss_id=hg_104161.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DMY1 H0Y3D6 | ||
}} | }} | ||
Revision as of 20:40, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000377265.3 uc057scw.1 AK297683 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000377265.3:0 uc057scw.1:0 AK297683:0 ENST00000411849.1:2 ENST00000492202.1:-461 uc057scv.1:-461 |
TATA-Box annotation
| Distance to TSS: | 239473 |
|---|---|
| Nearest PromoterID: | NR_120646 |
| Entrez ID: | 101928834 |
| Nearest Unigene: | Hs.676482 |
| Nearest Refseq: | NR_120646 |
| Nearest Ensembl: | ENSG00000233968 |
| Gene Name: | MAM and LDL receptor class A domain containing 1 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101928834 |
| Gene Type: | ncRNA |
| CpG%: | 0.07 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
