Difference between revisions of "TSS:Hg 104209.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=-35 |entrez_id=8028 |gc_percent=0.81592 |gene_alias=AF10 |gene_description="myeloid/lymphoid or mixed-lineage leukemia; translo...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000377100.7:25 uc001iqq.3:25 BC032532:25 NM_001195630:32 NM_001195628:32 NM_004641:32 NM_001195627:32 ENST00000377072.7:33 uc001iqs.4:33 U13948:198 ENST00000307729.11:203 uc001iqt.4:203 BC065376:203 BC080577:203 ENST00000377091.6:205 uc001iqr.3:205 AB209755:326 ENST00000471315.5:328 uc057sdv.1:328 BC052798:334 BC094844:337 BC129946:339 ENST00000495130.5:350 uc057sdw.1:350 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| + | |distance=25 | ||
|distance_to_tss=-35 | |distance_to_tss=-35 | ||
| + | |end=21534140 | ||
|entrez_id=8028 | |entrez_id=8028 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
|gene_alias=AF10 | |gene_alias=AF10 | ||
|gene_description="myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10" | |gene_description="myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10" | ||
| − | |gene_name=MLLT10 | + | |gene_id=8028 |
| + | |gene_name="myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10" | ||
| + | |gene_source=HGNC:16063 | ||
| + | |gene_symbol=MLLT10 | ||
| + | |gene_synonyms=AF10 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16063 | ||
|nearest_ensembl=ENSG00000078403 | |nearest_ensembl=ENSG00000078403 | ||
|nearest_promoter_id=NM_001195627 | |nearest_promoter_id=NM_001195627 | ||
|nearest_refseq=NM_004641 | |nearest_refseq=NM_004641 | ||
|nearest_unigene=Hs.30385 | |nearest_unigene=Hs.30385 | ||
| + | |num_trans=24 | ||
| + | |species=human | ||
| + | |start=21534133 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000377100.7 uc001iqq.3 BC032532 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104209.1 | |tss_id=hg_104209.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P55197 | ||
}} | }} | ||
Revision as of 20:42, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000377100.7 uc001iqq.3 BC032532 |
|---|---|
| Distance: | 25 |
| Num_trans: | 24 |
| All_trans: | ENST00000377100.7:25 uc001iqq.3:25 BC032532:25 NM_001195630:32 NM_001195628:32 NM_004641:32 NM_001195627:32 ENST00000377072.7:33 uc001iqs.4:33 U13948:198 ENST00000307729.11:203 uc001iqt.4:203 BC065376:203 BC080577:203 ENST00000377091.6:205 uc001iqr.3:205 AB209755:326 ENST00000471315.5:328 uc057sdv.1:328 BC052798:334 BC094844:337 BC129946:339 ENST00000495130.5:350 uc057sdw.1:350 |
TATA-Box annotation
| Distance to TSS: | -35 |
|---|---|
| Nearest PromoterID: | NM_001195627 |
| Entrez ID: | 8028 |
| Nearest Unigene: | Hs.30385 |
| Nearest Refseq: | NM_004641 |
| Nearest Ensembl: | ENSG00000078403 |
| Gene Name: | "myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10" |
| Gene Alias: | AF10 |
| Gene Description: | "myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10" |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
