Difference between revisions of "TSS:Hg 104323.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=-20303 |entrez_id=693188 |gc_percent=0.552239 |gene_alias=MIRN603|hsa-mir-603 |gene_description=microRNA 603 |gene_name=MIR603 |...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK303905:-52 ENST00000621023.1:-134 uc057sha.1:-134 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| + | |distance=-52 | ||
|distance_to_tss=-20303 | |distance_to_tss=-20303 | ||
| + | |end=24255384 | ||
|entrez_id=693188 | |entrez_id=693188 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
|gene_alias=MIRN603|hsa-mir-603 | |gene_alias=MIRN603|hsa-mir-603 | ||
|gene_description=microRNA 603 | |gene_description=microRNA 603 | ||
| − | |gene_name= | + | |gene_id=56243 |
| + | |gene_name=KIAA1217 | ||
| + | |gene_source=HGNC:25428 | ||
| + | |gene_symbol=KIAA1217 | ||
| + | |gene_synonyms=DKFZP761L0424 SKT | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:25428 | ||
| + | |hsa-mir-603= | ||
|nearest_ensembl=ENSG00000207930 | |nearest_ensembl=ENSG00000207930 | ||
|nearest_promoter_id=NR_030334 | |nearest_promoter_id=NR_030334 | ||
|nearest_refseq=NR_030334 | |nearest_refseq=NR_030334 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=24255379 | ||
| + | |strand=+ | ||
|tata_box="71(GAACATTAAAGG,-,0.00)" | |tata_box="71(GAACATTAAAGG,-,0.00)" | ||
| + | |transcript_name=AK303905 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104323.1 | |tss_id=hg_104323.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4E1M3 | ||
}} | }} | ||
Revision as of 20:47, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK303905 |
|---|---|
| Distance: | -52 |
| Num_trans: | 3 |
| All_trans: | AK303905:-52 ENST00000621023.1:-134 uc057sha.1:-134 |
TATA-Box annotation
| Distance to TSS: | -20303 |
|---|---|
| Nearest PromoterID: | NR_030334 |
| Entrez ID: | 693188 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_030334 |
| Nearest Ensembl: | ENSG00000207930 |
| Gene Name: | KIAA1217 |
| Gene Alias: | MIRN603 |
| Gene Description: | microRNA 603 |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "71(GAACATTAAAGG,-,0.00)" |
