Difference between revisions of "TSS:Hg 10444.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.065 |distance_to_tss=-459 |entrez_id=79180 |gc_percent=0.577114 |gene_alias=SWS1 |gene_description=EF-hand domain family member D2 |gene_name=EFHD2...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000427824.1:0 uc057cne.1:0 BC045184:0 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| + | |distance=0 | ||
|distance_to_tss=-459 | |distance_to_tss=-459 | ||
| + | |end=15409442 | ||
|entrez_id=79180 | |entrez_id=79180 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
|gene_alias=SWS1 | |gene_alias=SWS1 | ||
|gene_description=EF-hand domain family member D2 | |gene_description=EF-hand domain family member D2 | ||
| − | |gene_name= | + | |gene_id=101927441 |
| + | |gene_name=uncharacterized LOC101927441 | ||
| + | |gene_source=EntrezGene:101927441 | ||
| + | |gene_symbol=LOC101927441 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000142634 | |nearest_ensembl=ENSG00000142634 | ||
|nearest_promoter_id=NM_024329 | |nearest_promoter_id=NM_024329 | ||
|nearest_refseq=NM_024329 | |nearest_refseq=NM_024329 | ||
|nearest_unigene=Hs.465374 | |nearest_unigene=Hs.465374 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=15409429 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000427824.1 uc057cne.1 BC045184 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10444.1 | |tss_id=hg_10444.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:52, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000427824.1 uc057cne.1 BC045184 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000427824.1:0 uc057cne.1:0 BC045184:0 |
TATA-Box annotation
| Distance to TSS: | -459 |
|---|---|
| Nearest PromoterID: | NM_024329 |
| Entrez ID: | 79180 |
| Nearest Unigene: | Hs.465374 |
| Nearest Refseq: | NM_024329 |
| Nearest Ensembl: | ENSG00000142634 |
| Gene Name: | uncharacterized LOC101927441 |
| Gene Alias: | SWS1 |
| Gene Description: | EF-hand domain family member D2 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
