Difference between revisions of "TSS:Hg 104488.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=-361 |entrez_id=51322 |gc_percent=0.756219 |gene_alias=BM-016|DESSH|PRO1741|Wwp4 |gene_description=WW domain containing adaptor...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DESSH= | ||
| + | |PRO1741= | ||
| + | |Wwp4= | ||
| + | |all_trans=BC001654:32 ENST00000347934.8:160 uc001iug.4:160 ENST00000354911.8:266 uc001iuf.4:266 BC001026:-313 ENST00000375646.5:-325 uc057sli.1:-325 ENST00000532233.5:-330 uc057slh.1:-330 ENST00000528491.5:-333 uc057slg.1:-333 AK225846:-334 ENST00000526722.1:-336 uc057slf.1:-336 AK055852:-338 NM_016628:339 NM_100486:339 AK290174:347 AK223600:351 BC004258:352 ENST00000420266.5:353 uc057slj.1:353 ENST00000428935.5:387 ENST00000424454.5:387 uc057slk.1:387 uc057sll.1:387 AF116666:387 JF432760:425 KJ902580:425 AB590052:427 ENST00000530865.5:444 uc057slm.1:444 AK297460:444 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| + | |distance=32 | ||
|distance_to_tss=-361 | |distance_to_tss=-361 | ||
| + | |end=28533153 | ||
|entrez_id=51322 | |entrez_id=51322 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_016628 | |nearest_refseq=NM_016628 | ||
|nearest_unigene=Hs.743224 | |nearest_unigene=Hs.743224 | ||
| + | |num_trans=34 | ||
| + | |species=human | ||
| + | |start=28533108 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC001654 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104488.1 | |tss_id=hg_104488.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 20:54, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC001654 |
|---|---|
| Distance: | 32 |
| Num_trans: | 34 |
| All_trans: | BC001654:32 ENST00000347934.8:160 uc001iug.4:160 ENST00000354911.8:266 uc001iuf.4:266 BC001026:-313 ENST00000375646.5:-325 uc057sli.1:-325 ENST00000532233.5:-330 uc057slh.1:-330 ENST00000528491.5:-333 uc057slg.1:-333 AK225846:-334 ENST00000526722.1:-336 uc057slf.1:-336 AK055852:-338 NM_016628:339 NM_100486:339 AK290174:347 AK223600:351 BC004258:352 ENST00000420266.5:353 uc057slj.1:353 ENST00000428935.5:387 ENST00000424454.5:387 uc057slk.1:387 uc057sll.1:387 AF116666:387 JF432760:425 KJ902580:425 AB590052:427 ENST00000530865.5:444 uc057slm.1:444 AK297460:444 |
TATA-Box annotation
| Distance to TSS: | -361 |
|---|---|
| Nearest PromoterID: | NM_016628 |
| Entrez ID: | 51322 |
| Nearest Unigene: | Hs.743224 |
| Nearest Refseq: | NM_016628 |
| Nearest Ensembl: | ENSG00000095787 |
| Gene Name: | WAC |
| Gene Alias: | BM-016 |
| Gene Description: | WW domain containing adaptor with coiled-coil |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
