Difference between revisions of "TSS:Hg 104665.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=12 |entrez_id=1390 |gc_percent=0.696517 |gene_alias=CREM-2|ICER|hCREM-2 |gene_description=cAMP responsive element modulator |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ICER= | ||
| + | |all_trans=ENST00000496626.5:0 NM_001267563:0 NM_001267562:0 NM_001881:0 NM_183013:0 NR_051975:0 NR_051974:0 NR_051973:0 uc057sse.1:0 ENST00000482646.5:1 uc057ssf.1:1 ENST00000374721.7:-24 uc057ssd.1:-24 ENST00000489388.5:34 uc057ssg.1:34 ENST00000474362.5:-43 uc001ixy.4:-43 ENST00000374726.7:51 uc001ixx.4:51 BC066342:51 ENST00000461968.5:76 uc057ssh.1:76 ENST00000490460.5:87 uc057ssi.1:87 BC017117:105 ENST00000466251.5:117 uc057ssj.1:117 ENST00000482633.5:176 uc057ssk.1:176 ENST00000495960.5:191 uc057ssl.1:191 ENST00000429130.7:219 uc057ssm.1:219 ENST00000469949.6:230 uc057ssn.1:230 ENST00000460270.5:245 uc001ixz.4:245 ENST00000496019.5:284 uc057sso.1:284 ENST00000354759.7:290 uc001iya.4:290 D14825:290 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| + | |distance=0 | ||
|distance_to_tss=12 | |distance_to_tss=12 | ||
| + | |end=35126872 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
|gene_alias=CREM-2|ICER|hCREM-2 | |gene_alias=CREM-2|ICER|hCREM-2 | ||
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
| − | |gene_name=CREM | + | |gene_id=1390 |
| + | |gene_name=cAMP responsive element modulator | ||
| + | |gene_source=HGNC:2352 | ||
| + | |gene_symbol=CREM | ||
| + | |gene_synonyms=hCREM-2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCREM-2= | ||
| + | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
|nearest_promoter_id=NR_051975 | |nearest_promoter_id=NR_051975 | ||
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| + | |num_trans=42 | ||
| + | |species=human | ||
| + | |start=35126833 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000496626.5 NM_001267563 NM_001267562 NM_001881 NM_183013 NR_051975 NR_051974 NR_051973 uc057sse.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104665.1 | |tss_id=hg_104665.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q03060 | ||
}} | }} | ||
Revision as of 21:02, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000496626.5 NM_001267563 NM_001267562 NM_001881 NM_183013 NR_051975 NR_051974 NR_051973 uc057sse.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 42 |
| All_trans: | ENST00000496626.5:0 NM_001267563:0 NM_001267562:0 NM_001881:0 NM_183013:0 NR_051975:0 NR_051974:0 NR_051973:0 uc057sse.1:0 ENST00000482646.5:1 uc057ssf.1:1 ENST00000374721.7:-24 uc057ssd.1:-24 ENST00000489388.5:34 uc057ssg.1:34 ENST00000474362.5:-43 uc001ixy.4:-43 ENST00000374726.7:51 uc001ixx.4:51 BC066342:51 ENST00000461968.5:76 uc057ssh.1:76 ENST00000490460.5:87 uc057ssi.1:87 BC017117:105 ENST00000466251.5:117 uc057ssj.1:117 ENST00000482633.5:176 uc057ssk.1:176 ENST00000495960.5:191 uc057ssl.1:191 ENST00000429130.7:219 uc057ssm.1:219 ENST00000469949.6:230 uc057ssn.1:230 ENST00000460270.5:245 uc001ixz.4:245 ENST00000496019.5:284 uc057sso.1:284 ENST00000354759.7:290 uc001iya.4:290 D14825:290 |
TATA-Box annotation
| Distance to TSS: | 12 |
|---|---|
| Nearest PromoterID: | NR_051975 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
