Difference between revisions of "TSS:Hg 104667.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=194 |entrez_id=1390 |gc_percent=0.756219 |gene_alias=CREM-2|ICER|hCREM-2 |gene_description=cAMP responsive element modulator |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ICER= | ||
| + | |all_trans=ENST00000482633.5:1 uc057ssk.1:1 ENST00000495960.5:16 uc057ssl.1:16 ENST00000466251.5:-35 uc057ssj.1:-35 ENST00000429130.7:44 uc057ssm.1:44 BC017117:-47 ENST00000469949.6:55 uc057ssn.1:55 ENST00000490460.5:-65 uc057ssi.1:-65 ENST00000460270.5:70 uc001ixz.4:70 ENST00000461968.5:-76 uc057ssh.1:-76 ENST00000374726.7:-101 uc001ixx.4:-101 BC066342:-101 ENST00000496019.5:109 uc057sso.1:109 ENST00000354759.7:115 uc001iya.4:115 D14825:115 ENST00000489388.5:-118 uc057ssg.1:-118 ENST00000482646.5:-151 uc057ssf.1:-151 ENST00000496626.5:-183 NM_001267563:-183 NM_001267562:-183 NM_001881:-183 NM_183013:-183 NR_051975:-183 NR_051974:-183 NR_051973:-183 uc057sse.1:-183 ENST00000374721.7:-214 uc057ssd.1:-214 ENST00000474362.5:-233 uc001ixy.4:-233 ENST00000489321.5:377 uc057ssp.1:377 ENST00000427847.6:410 ENST00000374728.7:410 NM_183060:410 NM_181571:410 uc057ssq.1:410 uc001iyc.4:410 ENST00000345491.7:413 uc001iyb.4:413 BC041810:413 ENST00000487132.5:430 uc057ssr.1:430 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=1 | ||
|distance_to_tss=194 | |distance_to_tss=194 | ||
| + | |end=35127047 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
|gene_alias=CREM-2|ICER|hCREM-2 | |gene_alias=CREM-2|ICER|hCREM-2 | ||
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
| − | |gene_name=CREM | + | |gene_id=1390 |
| + | |gene_name=cAMP responsive element modulator | ||
| + | |gene_source=HGNC:2352 | ||
| + | |gene_symbol=CREM | ||
| + | |gene_synonyms=hCREM-2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCREM-2= | ||
| + | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
|nearest_promoter_id=NR_051975 | |nearest_promoter_id=NR_051975 | ||
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| + | |num_trans=55 | ||
| + | |species=human | ||
| + | |start=35127023 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000482633.5 uc057ssk.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104667.1 | |tss_id=hg_104667.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:02, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000482633.5 uc057ssk.1 |
|---|---|
| Distance: | 1 |
| Num_trans: | 55 |
| All_trans: | ENST00000482633.5:1 uc057ssk.1:1 ENST00000495960.5:16 uc057ssl.1:16 ENST00000466251.5:-35 uc057ssj.1:-35 ENST00000429130.7:44 uc057ssm.1:44 BC017117:-47 ENST00000469949.6:55 uc057ssn.1:55 ENST00000490460.5:-65 uc057ssi.1:-65 ENST00000460270.5:70 uc001ixz.4:70 ENST00000461968.5:-76 uc057ssh.1:-76 ENST00000374726.7:-101 uc001ixx.4:-101 BC066342:-101 ENST00000496019.5:109 uc057sso.1:109 ENST00000354759.7:115 uc001iya.4:115 D14825:115 ENST00000489388.5:-118 uc057ssg.1:-118 ENST00000482646.5:-151 uc057ssf.1:-151 ENST00000496626.5:-183 NM_001267563:-183 NM_001267562:-183 NM_001881:-183 NM_183013:-183 NR_051975:-183 NR_051974:-183 NR_051973:-183 uc057sse.1:-183 ENST00000374721.7:-214 uc057ssd.1:-214 ENST00000474362.5:-233 uc001ixy.4:-233 ENST00000489321.5:377 uc057ssp.1:377 ENST00000427847.6:410 ENST00000374728.7:410 NM_183060:410 NM_181571:410 uc057ssq.1:410 uc001iyc.4:410 ENST00000345491.7:413 uc001iyb.4:413 BC041810:413 ENST00000487132.5:430 uc057ssr.1:430 |
TATA-Box annotation
| Distance to TSS: | 194 |
|---|---|
| Nearest PromoterID: | NR_051975 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
