Difference between revisions of "TSS:Hg 104668.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=245 |entrez_id=1390 |gc_percent=0.691542 |gene_alias=CREM-2|ICER|hCREM-2 |gene_description=cAMP responsive element modulator |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ICER= | ||
| + | |all_trans=ENST00000495960.5:0 ENST00000429130.7:0 ENST00000469949.6:0 ENST00000460270.5:0 uc057ssl.1:0 uc057ssm.1:0 uc057ssn.1:0 uc001ixz.4:0 ENST00000482633.5:-3 uc057ssk.1:-3 ENST00000496019.5:34 uc057sso.1:34 ENST00000354759.7:40 uc001iya.4:40 D14825:40 ENST00000466251.5:-62 uc057ssj.1:-62 BC017117:-74 ENST00000490460.5:-92 uc057ssi.1:-92 ENST00000461968.5:-103 uc057ssh.1:-103 ENST00000374726.7:-128 uc001ixx.4:-128 BC066342:-128 ENST00000489388.5:-145 uc057ssg.1:-145 ENST00000482646.5:-178 uc057ssf.1:-178 ENST00000496626.5:-210 NM_001267563:-210 NM_001267562:-210 NM_001881:-210 NM_183013:-210 NR_051975:-210 NR_051974:-210 NR_051973:-210 uc057sse.1:-210 ENST00000374721.7:-241 uc057ssd.1:-241 ENST00000474362.5:-260 uc001ixy.4:-260 ENST00000489321.5:302 uc057ssp.1:302 ENST00000427847.6:335 ENST00000374728.7:335 NM_183060:335 NM_181571:335 uc057ssq.1:335 uc001iyc.4:335 ENST00000345491.7:338 uc001iyb.4:338 BC041810:338 ENST00000487132.5:355 uc057ssr.1:355 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=0 | ||
|distance_to_tss=245 | |distance_to_tss=245 | ||
| + | |end=35127122 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
|gene_alias=CREM-2|ICER|hCREM-2 | |gene_alias=CREM-2|ICER|hCREM-2 | ||
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
| − | |gene_name=CREM | + | |gene_id=1390 |
| + | |gene_name=cAMP responsive element modulator | ||
| + | |gene_source=HGNC:2352 | ||
| + | |gene_symbol=CREM | ||
| + | |gene_synonyms=hCREM-2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCREM-2= | ||
| + | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
|nearest_promoter_id=NR_051975 | |nearest_promoter_id=NR_051975 | ||
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| + | |num_trans=55 | ||
| + | |species=human | ||
| + | |start=35127050 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000495960.5 ENST00000429130.7 ENST00000469949.6 ENST00000460270.5 uc057ssl.1 uc057ssm.1 uc057ssn.1 uc001ixz.4 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104668.1 | |tss_id=hg_104668.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=E9PAR2 F8WDF2 J3KQC0 R4GN75 | ||
}} | }} | ||
Revision as of 21:02, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000495960.5 ENST00000429130.7 ENST00000469949.6 ENST00000460270.5 uc057ssl.1 uc057ssm.1 uc057ssn.1 uc001ixz.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 55 |
| All_trans: | ENST00000495960.5:0 ENST00000429130.7:0 ENST00000469949.6:0 ENST00000460270.5:0 uc057ssl.1:0 uc057ssm.1:0 uc057ssn.1:0 uc001ixz.4:0 ENST00000482633.5:-3 uc057ssk.1:-3 ENST00000496019.5:34 uc057sso.1:34 ENST00000354759.7:40 uc001iya.4:40 D14825:40 ENST00000466251.5:-62 uc057ssj.1:-62 BC017117:-74 ENST00000490460.5:-92 uc057ssi.1:-92 ENST00000461968.5:-103 uc057ssh.1:-103 ENST00000374726.7:-128 uc001ixx.4:-128 BC066342:-128 ENST00000489388.5:-145 uc057ssg.1:-145 ENST00000482646.5:-178 uc057ssf.1:-178 ENST00000496626.5:-210 NM_001267563:-210 NM_001267562:-210 NM_001881:-210 NM_183013:-210 NR_051975:-210 NR_051974:-210 NR_051973:-210 uc057sse.1:-210 ENST00000374721.7:-241 uc057ssd.1:-241 ENST00000474362.5:-260 uc001ixy.4:-260 ENST00000489321.5:302 uc057ssp.1:302 ENST00000427847.6:335 ENST00000374728.7:335 NM_183060:335 NM_181571:335 uc057ssq.1:335 uc001iyc.4:335 ENST00000345491.7:338 uc001iyb.4:338 BC041810:338 ENST00000487132.5:355 uc057ssr.1:355 |
TATA-Box annotation
| Distance to TSS: | 245 |
|---|---|
| Nearest PromoterID: | NR_051975 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
