Difference between revisions of "TSS:Hg 104670.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=-229 |entrez_id=1390 |gc_percent=0.721393 |gene_alias=CREM-2|ICER|hCREM-2 |gene_description=cAMP responsive element modulator |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ICER= | ||
| + | |all_trans=ENST00000354759.7:-53 uc001iya.4:-53 D14825:-53 ENST00000496019.5:-59 uc057sso.1:-59 ENST00000460270.5:-98 uc001ixz.4:-98 ENST00000469949.6:-113 uc057ssn.1:-113 ENST00000429130.7:-124 uc057ssm.1:-124 ENST00000495960.5:-152 uc057ssl.1:-152 ENST00000482633.5:-167 uc057ssk.1:-167 ENST00000489321.5:183 uc057ssp.1:183 ENST00000427847.6:216 ENST00000374728.7:216 NM_183060:216 NM_181571:216 uc057ssq.1:216 uc001iyc.4:216 ENST00000345491.7:219 uc001iyb.4:219 BC041810:219 ENST00000466251.5:-226 uc057ssj.1:-226 ENST00000487132.5:236 uc057ssr.1:236 BC017117:-238 ENST00000490460.5:-256 uc057ssi.1:-256 ENST00000461968.5:-267 uc057ssh.1:-267 ENST00000374726.7:-292 uc001ixx.4:-292 BC066342:-292 ENST00000489388.5:-309 uc057ssg.1:-309 ENST00000482646.5:-342 uc057ssf.1:-342 ENST00000496626.5:-374 NM_001267563:-374 NM_001267562:-374 NM_001881:-374 NM_183013:-374 NR_051975:-374 NR_051974:-374 NR_051973:-374 uc057sse.1:-374 ENST00000374721.7:-405 uc057ssd.1:-405 ENST00000474362.5:-424 uc001ixy.4:-424 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=-53 | ||
|distance_to_tss=-229 | |distance_to_tss=-229 | ||
| + | |end=35127241 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
|gene_alias=CREM-2|ICER|hCREM-2 | |gene_alias=CREM-2|ICER|hCREM-2 | ||
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
| − | |gene_name=CREM | + | |gene_id=1390 |
| + | |gene_name=cAMP responsive element modulator | ||
| + | |gene_source=HGNC:2352 | ||
| + | |gene_symbol=CREM | ||
| + | |gene_synonyms=hCREM-2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCREM-2= | ||
| + | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
|nearest_promoter_id=NM_183060 | |nearest_promoter_id=NM_183060 | ||
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| + | |num_trans=55 | ||
| + | |species=human | ||
| + | |start=35127214 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000354759.7 uc001iya.4 D14825 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104670.1 | |tss_id=hg_104670.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q03060 | ||
}} | }} | ||
Revision as of 21:02, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000354759.7 uc001iya.4 D14825 |
|---|---|
| Distance: | -53 |
| Num_trans: | 55 |
| All_trans: | ENST00000354759.7:-53 uc001iya.4:-53 D14825:-53 ENST00000496019.5:-59 uc057sso.1:-59 ENST00000460270.5:-98 uc001ixz.4:-98 ENST00000469949.6:-113 uc057ssn.1:-113 ENST00000429130.7:-124 uc057ssm.1:-124 ENST00000495960.5:-152 uc057ssl.1:-152 ENST00000482633.5:-167 uc057ssk.1:-167 ENST00000489321.5:183 uc057ssp.1:183 ENST00000427847.6:216 ENST00000374728.7:216 NM_183060:216 NM_181571:216 uc057ssq.1:216 uc001iyc.4:216 ENST00000345491.7:219 uc001iyb.4:219 BC041810:219 ENST00000466251.5:-226 uc057ssj.1:-226 ENST00000487132.5:236 uc057ssr.1:236 BC017117:-238 ENST00000490460.5:-256 uc057ssi.1:-256 ENST00000461968.5:-267 uc057ssh.1:-267 ENST00000374726.7:-292 uc001ixx.4:-292 BC066342:-292 ENST00000489388.5:-309 uc057ssg.1:-309 ENST00000482646.5:-342 uc057ssf.1:-342 ENST00000496626.5:-374 NM_001267563:-374 NM_001267562:-374 NM_001881:-374 NM_183013:-374 NR_051975:-374 NR_051974:-374 NR_051973:-374 uc057sse.1:-374 ENST00000374721.7:-405 uc057ssd.1:-405 ENST00000474362.5:-424 uc001ixy.4:-424 |
TATA-Box annotation
| Distance to TSS: | -229 |
|---|---|
| Nearest PromoterID: | NM_183060 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
