Difference between revisions of "TSS:Hg 104671.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=-207 |entrez_id=1390 |gc_percent=0.746269 |gene_alias=CREM-2|ICER|hCREM-2 |gene_description=cAMP responsive element modulator |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ICER= | ||
| + | |all_trans=ENST00000354759.7:-83 uc001iya.4:-83 D14825:-83 ENST00000496019.5:-89 uc057sso.1:-89 ENST00000460270.5:-128 uc001ixz.4:-128 ENST00000469949.6:-143 uc057ssn.1:-143 ENST00000429130.7:-154 uc057ssm.1:-154 ENST00000489321.5:168 uc057ssp.1:168 ENST00000495960.5:-182 uc057ssl.1:-182 ENST00000482633.5:-197 uc057ssk.1:-197 ENST00000427847.6:201 ENST00000374728.7:201 NM_183060:201 NM_181571:201 uc057ssq.1:201 uc001iyc.4:201 ENST00000345491.7:204 uc001iyb.4:204 BC041810:204 ENST00000487132.5:221 uc057ssr.1:221 ENST00000466251.5:-256 uc057ssj.1:-256 BC017117:-268 ENST00000490460.5:-286 uc057ssi.1:-286 ENST00000461968.5:-297 uc057ssh.1:-297 ENST00000374726.7:-322 uc001ixx.4:-322 BC066342:-322 ENST00000489388.5:-339 uc057ssg.1:-339 ENST00000482646.5:-372 uc057ssf.1:-372 ENST00000496626.5:-404 NM_001267563:-404 NM_001267562:-404 NM_001881:-404 NM_183013:-404 NR_051975:-404 NR_051974:-404 NR_051973:-404 uc057sse.1:-404 ENST00000374721.7:-435 uc057ssd.1:-435 ENST00000474362.5:-454 uc001ixy.4:-454 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=-83 | ||
|distance_to_tss=-207 | |distance_to_tss=-207 | ||
| + | |end=35127256 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
|gene_alias=CREM-2|ICER|hCREM-2 | |gene_alias=CREM-2|ICER|hCREM-2 | ||
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
| − | |gene_name=CREM | + | |gene_id=1390 |
| + | |gene_name=cAMP responsive element modulator | ||
| + | |gene_source=HGNC:2352 | ||
| + | |gene_symbol=CREM | ||
| + | |gene_synonyms=hCREM-2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCREM-2= | ||
| + | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
|nearest_promoter_id=NM_183060 | |nearest_promoter_id=NM_183060 | ||
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| + | |num_trans=55 | ||
| + | |species=human | ||
| + | |start=35127244 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000354759.7 uc001iya.4 D14825 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104671.1 | |tss_id=hg_104671.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q03060 | ||
}} | }} | ||
Revision as of 21:02, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000354759.7 uc001iya.4 D14825 |
|---|---|
| Distance: | -83 |
| Num_trans: | 55 |
| All_trans: | ENST00000354759.7:-83 uc001iya.4:-83 D14825:-83 ENST00000496019.5:-89 uc057sso.1:-89 ENST00000460270.5:-128 uc001ixz.4:-128 ENST00000469949.6:-143 uc057ssn.1:-143 ENST00000429130.7:-154 uc057ssm.1:-154 ENST00000489321.5:168 uc057ssp.1:168 ENST00000495960.5:-182 uc057ssl.1:-182 ENST00000482633.5:-197 uc057ssk.1:-197 ENST00000427847.6:201 ENST00000374728.7:201 NM_183060:201 NM_181571:201 uc057ssq.1:201 uc001iyc.4:201 ENST00000345491.7:204 uc001iyb.4:204 BC041810:204 ENST00000487132.5:221 uc057ssr.1:221 ENST00000466251.5:-256 uc057ssj.1:-256 BC017117:-268 ENST00000490460.5:-286 uc057ssi.1:-286 ENST00000461968.5:-297 uc057ssh.1:-297 ENST00000374726.7:-322 uc001ixx.4:-322 BC066342:-322 ENST00000489388.5:-339 uc057ssg.1:-339 ENST00000482646.5:-372 uc057ssf.1:-372 ENST00000496626.5:-404 NM_001267563:-404 NM_001267562:-404 NM_001881:-404 NM_183013:-404 NR_051975:-404 NR_051974:-404 NR_051973:-404 uc057sse.1:-404 ENST00000374721.7:-435 uc057ssd.1:-435 ENST00000474362.5:-454 uc001ixy.4:-454 |
TATA-Box annotation
| Distance to TSS: | -207 |
|---|---|
| Nearest PromoterID: | NM_183060 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
