Difference between revisions of "TSS:Hg 104672.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=-191 |entrez_id=1390 |gc_percent=0.761194 |gene_alias=CREM-2|ICER|hCREM-2 |gene_description=cAMP responsive element modulator |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ICER= | ||
| + | |all_trans=ENST00000354759.7:-102 uc001iya.4:-102 D14825:-102 ENST00000496019.5:-108 uc057sso.1:-108 ENST00000460270.5:-147 uc001ixz.4:-147 ENST00000489321.5:156 uc057ssp.1:156 ENST00000469949.6:-162 uc057ssn.1:-162 ENST00000429130.7:-173 uc057ssm.1:-173 ENST00000427847.6:189 ENST00000374728.7:189 NM_183060:189 NM_181571:189 uc057ssq.1:189 uc001iyc.4:189 ENST00000345491.7:192 uc001iyb.4:192 BC041810:192 ENST00000495960.5:-201 uc057ssl.1:-201 ENST00000487132.5:209 uc057ssr.1:209 ENST00000482633.5:-216 uc057ssk.1:-216 ENST00000466251.5:-275 uc057ssj.1:-275 BC017117:-287 ENST00000490460.5:-305 uc057ssi.1:-305 ENST00000461968.5:-316 uc057ssh.1:-316 ENST00000374726.7:-341 uc001ixx.4:-341 BC066342:-341 ENST00000489388.5:-358 uc057ssg.1:-358 ENST00000482646.5:-391 uc057ssf.1:-391 ENST00000496626.5:-423 NM_001267563:-423 NM_001267562:-423 NM_001881:-423 NM_183013:-423 NR_051975:-423 NR_051974:-423 NR_051973:-423 uc057sse.1:-423 ENST00000374721.7:-454 uc057ssd.1:-454 ENST00000474362.5:-473 uc001ixy.4:-473 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=-102 | ||
|distance_to_tss=-191 | |distance_to_tss=-191 | ||
| + | |end=35127268 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
|gene_alias=CREM-2|ICER|hCREM-2 | |gene_alias=CREM-2|ICER|hCREM-2 | ||
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
| − | |gene_name=CREM | + | |gene_id=1390 |
| + | |gene_name=cAMP responsive element modulator | ||
| + | |gene_source=HGNC:2352 | ||
| + | |gene_symbol=CREM | ||
| + | |gene_synonyms=hCREM-2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCREM-2= | ||
| + | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
|nearest_promoter_id=NM_183060 | |nearest_promoter_id=NM_183060 | ||
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| + | |num_trans=55 | ||
| + | |species=human | ||
| + | |start=35127263 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000354759.7 uc001iya.4 D14825 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104672.1 | |tss_id=hg_104672.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q03060 | ||
}} | }} | ||
Revision as of 21:02, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000354759.7 uc001iya.4 D14825 |
|---|---|
| Distance: | -102 |
| Num_trans: | 55 |
| All_trans: | ENST00000354759.7:-102 uc001iya.4:-102 D14825:-102 ENST00000496019.5:-108 uc057sso.1:-108 ENST00000460270.5:-147 uc001ixz.4:-147 ENST00000489321.5:156 uc057ssp.1:156 ENST00000469949.6:-162 uc057ssn.1:-162 ENST00000429130.7:-173 uc057ssm.1:-173 ENST00000427847.6:189 ENST00000374728.7:189 NM_183060:189 NM_181571:189 uc057ssq.1:189 uc001iyc.4:189 ENST00000345491.7:192 uc001iyb.4:192 BC041810:192 ENST00000495960.5:-201 uc057ssl.1:-201 ENST00000487132.5:209 uc057ssr.1:209 ENST00000482633.5:-216 uc057ssk.1:-216 ENST00000466251.5:-275 uc057ssj.1:-275 BC017117:-287 ENST00000490460.5:-305 uc057ssi.1:-305 ENST00000461968.5:-316 uc057ssh.1:-316 ENST00000374726.7:-341 uc001ixx.4:-341 BC066342:-341 ENST00000489388.5:-358 uc057ssg.1:-358 ENST00000482646.5:-391 uc057ssf.1:-391 ENST00000496626.5:-423 NM_001267563:-423 NM_001267562:-423 NM_001881:-423 NM_183013:-423 NR_051975:-423 NR_051974:-423 NR_051973:-423 uc057sse.1:-423 ENST00000374721.7:-454 uc057ssd.1:-454 ENST00000474362.5:-473 uc001ixy.4:-473 |
TATA-Box annotation
| Distance to TSS: | -191 |
|---|---|
| Nearest PromoterID: | NM_183060 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
