Difference between revisions of "TSS:Hg 104680.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=42 |entrez_id=1390 |gc_percent=0.40796 |gene_alias=CREM-2|ICER|hCREM-2 |gene_description=cAMP responsive element modulator |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ICER= | ||
| + | |all_trans=AF069065:14 U44836:14 ENST00000356917.9:-16 uc001iyo.4:-16 ENST00000488328.5:-30 uc001iyn.4:-30 AK290612:-30 ENST00000487763.5:-36 ENST00000473940.5:-36 NM_001267569:-36 NM_001267568:-36 NM_182718:-36 NM_182717:-36 NM_182720:-36 NM_182719:-36 uc001iyl.4:-36 uc001iym.4:-36 D14826:-36 | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=14 | ||
|distance_to_tss=42 | |distance_to_tss=42 | ||
| + | |end=35195176 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
|gene_alias=CREM-2|ICER|hCREM-2 | |gene_alias=CREM-2|ICER|hCREM-2 | ||
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
| − | |gene_name=CREM | + | |gene_id=1390 |
| + | |gene_name=cAMP responsive element modulator | ||
| + | |gene_source=HGNC:2352 | ||
| + | |gene_symbol=CREM | ||
| + | |gene_synonyms=hCREM-2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCREM-2= | ||
| + | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
|nearest_promoter_id=NM_182719 | |nearest_promoter_id=NM_182719 | ||
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=35195162 | ||
| + | |strand=+ | ||
| + | |transcript_name=AF069065 U44836 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104680.1 | |tss_id=hg_104680.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:03, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF069065 U44836 |
|---|---|
| Distance: | 14 |
| Num_trans: | 18 |
| All_trans: | AF069065:14 U44836:14 ENST00000356917.9:-16 uc001iyo.4:-16 ENST00000488328.5:-30 uc001iyn.4:-30 AK290612:-30 ENST00000487763.5:-36 ENST00000473940.5:-36 NM_001267569:-36 NM_001267568:-36 NM_182718:-36 NM_182717:-36 NM_182720:-36 NM_182719:-36 uc001iyl.4:-36 uc001iym.4:-36 D14826:-36 |
TATA-Box annotation
| Distance to TSS: | 42 |
|---|---|
| Nearest PromoterID: | NM_182719 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
