Difference between revisions of "TSS:Hg 104758.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.11 |distance_to_tss=-11372 |entrez_id=3185 |gc_percent=0.726368 |gene_alias=HNRPF|OK/SW-cl.23|mcs94-1 |gene_description=heterogeneous nuclear ribonu...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |OK/SW-cl.23= | ||
| + | |all_trans=ENST00000442526.2:103 uc057swl.1:103 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| + | |distance=103 | ||
|distance_to_tss=-11372 | |distance_to_tss=-11372 | ||
| + | |end=43420635 | ||
|entrez_id=3185 | |entrez_id=3185 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=HNRPF|OK/SW-cl.23|mcs94-1 | |gene_alias=HNRPF|OK/SW-cl.23|mcs94-1 | ||
|gene_description=heterogeneous nuclear ribonucleoprotein F | |gene_description=heterogeneous nuclear ribonucleoprotein F | ||
| − | |gene_name= | + | |gene_id=105378272 |
| + | |gene_name=uncharacterized LOC105378272 | ||
| + | |gene_source=EntrezGene:105378272 | ||
| + | |gene_symbol=LOC105378272 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id= | ||
| + | |mcs94-1= | ||
|nearest_ensembl=ENSG00000169813 | |nearest_ensembl=ENSG00000169813 | ||
|nearest_promoter_id=NM_001098204 | |nearest_promoter_id=NM_001098204 | ||
|nearest_refseq=NM_004966 | |nearest_refseq=NM_004966 | ||
|nearest_unigene=Hs.808 | |nearest_unigene=Hs.808 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=43420604 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000442526.2 uc057swl.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104758.1 | |tss_id=hg_104758.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:06, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000442526.2 uc057swl.1 |
|---|---|
| Distance: | 103 |
| Num_trans: | 2 |
| All_trans: | ENST00000442526.2:103 uc057swl.1:103 |
TATA-Box annotation
| Distance to TSS: | -11372 |
|---|---|
| Nearest PromoterID: | NM_001098204 |
| Entrez ID: | 3185 |
| Nearest Unigene: | Hs.808 |
| Nearest Refseq: | NM_004966 |
| Nearest Ensembl: | ENSG00000169813 |
| Gene Name: | uncharacterized LOC105378272 |
| Gene Alias: | HNRPF |
| Gene Description: | heterogeneous nuclear ribonucleoprotein F |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
