Difference between revisions of "TSS:Hg 104760.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=-12 |entrez_id=642819 |gc_percent=0.691542 |gene_alias=KRBO1|ZNF487P |gene_description=zinc finger protein 487 |gene_name=ZNF487...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ZNF487P= | ||
| + | |all_trans=ENST00000456416.5:3 ENST00000437590.2:3 NR_026693:3 uc057swn.1:3 uc010qfb.2:3 AK302442:3 ENST00000490208.1:25 uc057swo.1:25 ENST00000451167.1:35 uc057swp.1:35 ENST00000315429.10:-265 uc057swm.1:-265 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=3 | ||
|distance_to_tss=-12 | |distance_to_tss=-12 | ||
| + | |end=43437123 | ||
|entrez_id=642819 | |entrez_id=642819 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
|gene_alias=KRBO1|ZNF487P | |gene_alias=KRBO1|ZNF487P | ||
|gene_description=zinc finger protein 487 | |gene_description=zinc finger protein 487 | ||
| − | |gene_name=ZNF487 | + | |gene_id=642819 |
| + | |gene_name=zinc finger protein 487 | ||
| + | |gene_source=HGNC:23488 | ||
| + | |gene_symbol=ZNF487 | ||
| + | |gene_synonyms= | ||
|gene_type=pseudo | |gene_type=pseudo | ||
| + | |hgnc_mgi_id=HGNC:23488 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_026693 | |nearest_promoter_id=NR_026693 | ||
|nearest_refseq=NR_026693 | |nearest_refseq=NR_026693 | ||
|nearest_unigene=Hs.719657 | |nearest_unigene=Hs.719657 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=43437105 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000456416.5 ENST00000437590.2 NR_026693 uc057swn.1 uc010qfb.2 AK302442 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104760.1 | |tss_id=hg_104760.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B1APH4 B2REC8 | ||
}} | }} | ||
Revision as of 21:06, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000456416.5 ENST00000437590.2 NR_026693 uc057swn.1 uc010qfb.2 AK302442 |
|---|---|
| Distance: | 3 |
| Num_trans: | 12 |
| All_trans: | ENST00000456416.5:3 ENST00000437590.2:3 NR_026693:3 uc057swn.1:3 uc010qfb.2:3 AK302442:3 ENST00000490208.1:25 uc057swo.1:25 ENST00000451167.1:35 uc057swp.1:35 ENST00000315429.10:-265 uc057swm.1:-265 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NR_026693 |
| Entrez ID: | 642819 |
| Nearest Unigene: | Hs.719657 |
| Nearest Refseq: | NR_026693 |
| Nearest Ensembl: | |
| Gene Name: | zinc finger protein 487 |
| Gene Alias: | KRBO1 |
| Gene Description: | zinc finger protein 487 |
| Gene Type: | pseudo |
| CpG%: | 0.1 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
