Difference between revisions of "TSS:Hg 10485.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.11 |distance_to_tss=42 |entrez_id=7709 |gc_percent=0.671642 |gene_alias=MIZ-1|ZNF151|ZNF60|pHZ-67 |gene_description=zinc finger and BTB domain conta...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ZNF151= | ||
| + | |ZNF60= | ||
| + | |all_trans=ENST00000537142.5:0 ENST00000479282.5:0 uc010obq.3:0 uc057cpx.1:0 AK223618:0 AK301896:0 AK303823:0 AK315201:0 AK299820:0 AK302610:0 AK311083:0 AK309081:0 AK294796:-12 ENST00000375743.8:-16 uc001axl.5:-16 ENST00000375733.6:-22 NM_003443:-22 NM_001242884:-22 NM_001287604:-22 NM_001287603:-22 uc010obr.3:-22 AK226168:28 Y09723:52 BC126163:76 BC143965:76 BC143968:76 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| + | |distance=0 | ||
|distance_to_tss=42 | |distance_to_tss=42 | ||
| + | |end=15976110 | ||
|entrez_id=7709 | |entrez_id=7709 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
|gene_alias=MIZ-1|ZNF151|ZNF60|pHZ-67 | |gene_alias=MIZ-1|ZNF151|ZNF60|pHZ-67 | ||
|gene_description=zinc finger and BTB domain containing 17 | |gene_description=zinc finger and BTB domain containing 17 | ||
| − | |gene_name=ZBTB17 | + | |gene_id=7709 |
| + | |gene_name=zinc finger and BTB domain containing 17 | ||
| + | |gene_source=HGNC:12936 | ||
| + | |gene_symbol=ZBTB17 | ||
| + | |gene_synonyms=MIZ1 pHZ-67 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:12936 | ||
|nearest_ensembl=ENSG00000116809 | |nearest_ensembl=ENSG00000116809 | ||
|nearest_promoter_id=NM_001324138 | |nearest_promoter_id=NM_001324138 | ||
|nearest_refseq=NM_003443 | |nearest_refseq=NM_003443 | ||
|nearest_unigene=Hs.433764 | |nearest_unigene=Hs.433764 | ||
| + | |num_trans=26 | ||
| + | |pHZ-67= | ||
| + | |species=human | ||
| + | |start=15976070 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000537142.5 ENST00000479282.5 uc010obq.3 uc057cpx.1 AK223618 AK301896 AK303823 AK315201 AK299820 AK302610 AK311083 AK309081 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10485.1 | |tss_id=hg_10485.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B2RCP2 B4DSM7 B4DYU5 B4E1F9 Q13105 Q53EM1 | ||
}} | }} | ||
Revision as of 21:10, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000537142.5 ENST00000479282.5 uc010obq.3 uc057cpx.1 AK223618 AK301896 AK303823 AK315201 AK299820 AK302610 AK311083 AK309081 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26 |
| All_trans: | ENST00000537142.5:0 ENST00000479282.5:0 uc010obq.3:0 uc057cpx.1:0 AK223618:0 AK301896:0 AK303823:0 AK315201:0 AK299820:0 AK302610:0 AK311083:0 AK309081:0 AK294796:-12 ENST00000375743.8:-16 uc001axl.5:-16 ENST00000375733.6:-22 NM_003443:-22 NM_001242884:-22 NM_001287604:-22 NM_001287603:-22 uc010obr.3:-22 AK226168:28 Y09723:52 BC126163:76 BC143965:76 BC143968:76 |
TATA-Box annotation
| Distance to TSS: | 42 |
|---|---|
| Nearest PromoterID: | NM_001324138 |
| Entrez ID: | 7709 |
| Nearest Unigene: | Hs.433764 |
| Nearest Refseq: | NM_003443 |
| Nearest Ensembl: | ENSG00000116809 |
| Gene Name: | zinc finger and BTB domain containing 17 |
| Gene Alias: | MIZ-1 |
| Gene Description: | zinc finger and BTB domain containing 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
