Difference between revisions of "TSS:Hg 10486.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.11 |distance_to_tss=12 |entrez_id=7709 |gc_percent=0.636816 |gene_alias=MIZ-1|ZNF151|ZNF60|pHZ-67 |gene_description=zinc finger and BTB domain conta...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |ZNF151= | ||
| + | |ZNF60= | ||
| + | |all_trans=ENST00000375743.8:0 uc001axl.5:0 AK294796:0 AK223618:5 ENST00000375733.6:-6 NM_003443:-6 NM_001242884:-6 NM_001287604:-6 NM_001287603:-6 uc010obr.3:-6 ENST00000479282.5:10 uc057cpx.1:10 AK299820:25 AK303823:33 ENST00000537142.5:35 uc010obq.3:35 AK301896:35 AK315201:35 AK311083:35 AK309081:35 AK302610:37 AK226168:71 Y09723:95 BC126163:119 BC143965:119 BC143968:119 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| + | |distance=0 | ||
|distance_to_tss=12 | |distance_to_tss=12 | ||
| + | |end=15976126 | ||
|entrez_id=7709 | |entrez_id=7709 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
|gene_alias=MIZ-1|ZNF151|ZNF60|pHZ-67 | |gene_alias=MIZ-1|ZNF151|ZNF60|pHZ-67 | ||
|gene_description=zinc finger and BTB domain containing 17 | |gene_description=zinc finger and BTB domain containing 17 | ||
| − | |gene_name=ZBTB17 | + | |gene_id=7709 |
| + | |gene_name=zinc finger and BTB domain containing 17 | ||
| + | |gene_source=HGNC:12936 | ||
| + | |gene_symbol=ZBTB17 | ||
| + | |gene_synonyms=MIZ1 pHZ-67 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:12936 | ||
|nearest_ensembl=ENSG00000116809 | |nearest_ensembl=ENSG00000116809 | ||
|nearest_promoter_id=NM_001324138 | |nearest_promoter_id=NM_001324138 | ||
|nearest_refseq=NM_003443 | |nearest_refseq=NM_003443 | ||
|nearest_unigene=Hs.433764 | |nearest_unigene=Hs.433764 | ||
| + | |num_trans=26 | ||
| + | |pHZ-67= | ||
| + | |species=human | ||
| + | |start=15976113 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000375743.8 uc001axl.5 AK294796 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10486.1 | |tss_id=hg_10486.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DGV6 Q13105 | ||
}} | }} | ||
Revision as of 21:10, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375743.8 uc001axl.5 AK294796 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26 |
| All_trans: | ENST00000375743.8:0 uc001axl.5:0 AK294796:0 AK223618:5 ENST00000375733.6:-6 NM_003443:-6 NM_001242884:-6 NM_001287604:-6 NM_001287603:-6 uc010obr.3:-6 ENST00000479282.5:10 uc057cpx.1:10 AK299820:25 AK303823:33 ENST00000537142.5:35 uc010obq.3:35 AK301896:35 AK315201:35 AK311083:35 AK309081:35 AK302610:37 AK226168:71 Y09723:95 BC126163:119 BC143965:119 BC143968:119 |
TATA-Box annotation
| Distance to TSS: | 12 |
|---|---|
| Nearest PromoterID: | NM_001324138 |
| Entrez ID: | 7709 |
| Nearest Unigene: | Hs.433764 |
| Nearest Refseq: | NM_003443 |
| Nearest Ensembl: | ENSG00000116809 |
| Gene Name: | zinc finger and BTB domain containing 17 |
| Gene Alias: | MIZ-1 |
| Gene Description: | zinc finger and BTB domain containing 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
