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Difference between revisions of "TSS:Hg 104923.1"

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(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=29 |entrez_id=5592 |gc_percent=0.567164 |gene_alias=AAT8|PKG|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha |gene_descr...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|PKG=
 +
|PRKG1B=
 +
|PRKGR1B=
 +
|all_trans=AK300110:0 NM_001098512:-20 ENST00000373985.5:168 uc001jjm.4:168 D45864:168
 +
|cGK=
 +
|cGK 1=
 +
|cGK1=
 +
|cGKI=
 +
|cGKI-BETA=
 +
|cGKI-alpha=
 +
|chr=chr10
 
|cpg_percent=0.07
 
|cpg_percent=0.07
 +
|distance=0
 
|distance_to_tss=29
 
|distance_to_tss=29
 +
|end=50991190
 
|entrez_id=5592
 
|entrez_id=5592
 
|gc_percent=0.567164
 
|gc_percent=0.567164
 
|gene_alias=AAT8|PKG|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha
 
|gene_alias=AAT8|PKG|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha
 
|gene_description="protein kinase, cGMP-dependent, type I"
 
|gene_description="protein kinase, cGMP-dependent, type I"
|gene_name=PRKG1
+
|gene_id=5592
 +
|gene_name="protein kinase, cGMP-dependent, type I"
 +
|gene_source=HGNC:9414
 +
|gene_symbol=PRKG1
 +
|gene_synonyms=PGK PKG
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 +
|hgnc_mgi_id=HGNC:9414
 
|nearest_ensembl=ENSG00000185532
 
|nearest_ensembl=ENSG00000185532
 
|nearest_promoter_id=NM_001098512
 
|nearest_promoter_id=NM_001098512
 
|nearest_refseq=NM_006258
 
|nearest_refseq=NM_006258
 
|nearest_unigene=Hs.407535
 
|nearest_unigene=Hs.407535
 +
|num_trans=5
 +
|species=human
 +
|start=50991170
 +
|strand=+
 
|tata_box="-35(GCTTTTAGACTT,+,0.00)"
 
|tata_box="-35(GCTTTTAGACTT,+,0.00)"
 +
|transcript_name=AK300110
 +
|tss_classification=yes
 
|tss_id=hg_104923.1
 
|tss_id=hg_104923.1
 +
|tss_score=1
 +
|uniprot_id=B4DT93
 
}}
 
}}

Revision as of 21:13, 8 March 2018

Basic information about the TSS


TSS ID:hg_104923.1
Species:human
Chr:chr10
TSS Classification:yes
Start:50991170
End:50991190
Strand:+
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:AK300110
Distance:0
GeneID:5592
HGNC/MGI_ID:HGNC:9414
UniProt_ID:B4DT93
Gene_name:"protein kinase, cGMP-dependent, type I"
Gene_symbol:PRKG1
Gene_synonyms:PGK PKG
Gene_source:HGNC:9414



Transcript annotation


Transcript_name:AK300110
Distance:0
Num_trans:5
All_trans:AK300110:0 NM_001098512:-20 ENST00000373985.5:168 uc001jjm.4:168 D45864:168



TATA-Box annotation


Distance to TSS:29
Nearest PromoterID:NM_001098512
Entrez ID:5592
Nearest Unigene:Hs.407535
Nearest Refseq:NM_006258
Nearest Ensembl:ENSG00000185532
Gene Name:"protein kinase, cGMP-dependent, type I"
Gene Alias:AAT8
Gene Description:"protein kinase, cGMP-dependent, type I"
Gene Type:protein-coding
CpG%:0.07
GC%:0.567164
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-35(GCTTTTAGACTT,+,0.00)"