Difference between revisions of "TSS:Hg 10495.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=3314 |entrez_id=27129 |gc_percent=0.641791 |gene_alias=cvHSP |gene_description=heat shock protein family B (small) member 7 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK296598:-148 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=-148 | ||
|distance_to_tss=3314 | |distance_to_tss=3314 | ||
| + | |end=16015485 | ||
|entrez_id=27129 | |entrez_id=27129 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=cvHSP | |gene_alias=cvHSP | ||
|gene_description=heat shock protein family B (small) member 7 | |gene_description=heat shock protein family B (small) member 7 | ||
| + | |gene_id= | ||
|gene_name=HSPB7 | |gene_name=HSPB7 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000173641 | |nearest_ensembl=ENSG00000173641 | ||
|nearest_promoter_id=NM_014424 | |nearest_promoter_id=NM_014424 | ||
|nearest_refseq=NM_014424 | |nearest_refseq=NM_014424 | ||
|nearest_unigene=Hs.502612 | |nearest_unigene=Hs.502612 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=16015467 | ||
| + | |strand=- | ||
| + | |transcript_name=AK296598 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10495.1 | |tss_id=hg_10495.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DKJ9 | ||
}} | }} | ||
Revision as of 21:14, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK296598 |
|---|---|
| Distance: | -148 |
| Num_trans: | 1 |
| All_trans: | AK296598:-148 |
TATA-Box annotation
| Distance to TSS: | 3314 |
|---|---|
| Nearest PromoterID: | NM_014424 |
| Entrez ID: | 27129 |
| Nearest Unigene: | Hs.502612 |
| Nearest Refseq: | NM_014424 |
| Nearest Ensembl: | ENSG00000173641 |
| Gene Name: | HSPB7 |
| Gene Alias: | cvHSP |
| Gene Description: | heat shock protein family B (small) member 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
