Difference between revisions of "TSS:Hg 104970.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-168125 |entrez_id=4153 |gc_percent=0.552239 |gene_alias=COLEC1|HSMBPC|MBL|MBL2D|MBP|MBP-C|MBP1|MBPD |gene_description=mannose...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HSMBPC= | ||
| + | |MBL= | ||
| + | |MBL2D= | ||
| + | |MBP= | ||
| + | |MBP-C= | ||
| + | |MBP1= | ||
| + | |MBPD= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance= | ||
|distance_to_tss=-168125 | |distance_to_tss=-168125 | ||
| + | |end=52939830 | ||
|entrez_id=4153 | |entrez_id=4153 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| Line 12: | Line 22: | ||
|nearest_refseq=NM_000242 | |nearest_refseq=NM_000242 | ||
|nearest_unigene=Hs.499674 | |nearest_unigene=Hs.499674 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=52939820 | ||
| + | |strand=+ | ||
|tata_box="-100(CCCTTTAAATGA,-,0.00)" | |tata_box="-100(CCCTTTAAATGA,-,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104970.1 | |tss_id=hg_104970.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 21:15, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -168125 |
|---|---|
| Nearest PromoterID: | NM_000242 |
| Entrez ID: | 4153 |
| Nearest Unigene: | Hs.499674 |
| Nearest Refseq: | NM_000242 |
| Nearest Ensembl: | ENSG00000165471 |
| Gene Name: | MBL2 |
| Gene Alias: | COLEC1 |
| Gene Description: | mannose binding lectin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-100(CCCTTTAAATGA,-,0.00)" |
