Difference between revisions of "TSS:Hg 104977.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=52 |entrez_id=100463289 |gc_percent=0.328358 |gene_alias=HN5 |gene_description=MT-RNR2-like 5 |gene_name=MTRNR2L5 |gene_type=pro...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_001190478:-52 ENST00000512524.3:261 uc021pra.2:261 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=-52 | ||
|distance_to_tss=52 | |distance_to_tss=52 | ||
| + | |end=55599042 | ||
|entrez_id=100463289 | |entrez_id=100463289 | ||
|gc_percent=0.328358 | |gc_percent=0.328358 | ||
|gene_alias=HN5 | |gene_alias=HN5 | ||
|gene_description=MT-RNR2-like 5 | |gene_description=MT-RNR2-like 5 | ||
| − | |gene_name=MTRNR2L5 | + | |gene_id=100463289 |
| + | |gene_name=MT-RNR2-like 5 | ||
| + | |gene_source=HGNC:37162 | ||
| + | |gene_symbol=MTRNR2L5 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:37162 | ||
|nearest_ensembl=ENSG00000249860 | |nearest_ensembl=ENSG00000249860 | ||
|nearest_promoter_id=NM_001190478 | |nearest_promoter_id=NM_001190478 | ||
|nearest_refseq=NM_001190478 | |nearest_refseq=NM_001190478 | ||
|nearest_unigene=Hs.727204 | |nearest_unigene=Hs.727204 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=55599041 | ||
| + | |strand=+ | ||
| + | |transcript_name=NM_001190478 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104977.1 | |tss_id=hg_104977.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P0CJ72 | ||
}} | }} | ||
Revision as of 21:15, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001190478 |
|---|---|
| Distance: | -52 |
| Num_trans: | 3 |
| All_trans: | NM_001190478:-52 ENST00000512524.3:261 uc021pra.2:261 |
TATA-Box annotation
| Distance to TSS: | 52 |
|---|---|
| Nearest PromoterID: | NM_001190478 |
| Entrez ID: | 100463289 |
| Nearest Unigene: | Hs.727204 |
| Nearest Refseq: | NM_001190478 |
| Nearest Ensembl: | ENSG00000249860 |
| Gene Name: | MT-RNR2-like 5 |
| Gene Alias: | HN5 |
| Gene Description: | MT-RNR2-like 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.328358 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
