Difference between revisions of "TSS:Hg 104987.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=72 |entrez_id=55847 |gc_percent=0.656716 |gene_alias=C10orf70|MDS029|ZCD1|mitoNEET |gene_description=CDGSH iron sulfur domain 1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MDS029= | ||
| + | |ZCD1= | ||
| + | |all_trans=ENST00000464703.5:0 uc057tjl.1:0 BC059168:0 AF220049:0 BC008474:0 BC007043:0 AY960578:4 BC005962:-7 AK312017:12 NM_018464:-31 HQ448690:58 KJ894272:58 ENST00000333926.5:-75 uc001jkc.6:-75 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=0 | ||
|distance_to_tss=72 | |distance_to_tss=72 | ||
| + | |end=58269215 | ||
|entrez_id=55847 | |entrez_id=55847 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
|gene_alias=C10orf70|MDS029|ZCD1|mitoNEET | |gene_alias=C10orf70|MDS029|ZCD1|mitoNEET | ||
|gene_description=CDGSH iron sulfur domain 1 | |gene_description=CDGSH iron sulfur domain 1 | ||
| − | |gene_name=CISD1 | + | |gene_id=55847 |
| + | |gene_name=CDGSH iron sulfur domain 1 | ||
| + | |gene_source=HGNC:30880 | ||
| + | |gene_symbol=CISD1 | ||
| + | |gene_synonyms=MDS029 mitoNEET | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30880 | ||
| + | |mitoNEET= | ||
|nearest_ensembl=ENSG00000122873 | |nearest_ensembl=ENSG00000122873 | ||
|nearest_promoter_id=NM_018464 | |nearest_promoter_id=NM_018464 | ||
|nearest_refseq=NM_018464 | |nearest_refseq=NM_018464 | ||
|nearest_unigene=Hs.370102 | |nearest_unigene=Hs.370102 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=58269132 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000464703.5 uc057tjl.1 BC059168 AF220049 BC008474 BC007043 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104987.1 | |tss_id=hg_104987.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:16, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000464703.5 uc057tjl.1 BC059168 AF220049 BC008474 BC007043 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000464703.5:0 uc057tjl.1:0 BC059168:0 AF220049:0 BC008474:0 BC007043:0 AY960578:4 BC005962:-7 AK312017:12 NM_018464:-31 HQ448690:58 KJ894272:58 ENST00000333926.5:-75 uc001jkc.6:-75 |
TATA-Box annotation
| Distance to TSS: | 72 |
|---|---|
| Nearest PromoterID: | NM_018464 |
| Entrez ID: | 55847 |
| Nearest Unigene: | Hs.370102 |
| Nearest Refseq: | NM_018464 |
| Nearest Ensembl: | ENSG00000122873 |
| Gene Name: | CDGSH iron sulfur domain 1 |
| Gene Alias: | C10orf70 |
| Gene Description: | CDGSH iron sulfur domain 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
