Difference between revisions of "TSS:Hg 104994.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=7870 |entrez_id=7321 |gc_percent=0.393035 |gene_alias=E2(17)KB1|SFT|UBC4/5|UBCH5|UBCH5A |gene_description=ubiquitin conjugating...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SFT= | ||
| + | |UBC4/5= | ||
| + | |UBCH5= | ||
| + | |UBCH5A= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance= | ||
|distance_to_tss=7870 | |distance_to_tss=7870 | ||
| + | |end=58342849 | ||
|entrez_id=7321 | |entrez_id=7321 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_003338 | |nearest_refseq=NM_003338 | ||
|nearest_unigene=Hs.129683 | |nearest_unigene=Hs.129683 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=58342848 | ||
| + | |strand=+ | ||
|tata_box="-57(CCTTTTAAATTG,+,0.00)" | |tata_box="-57(CCTTTTAAATTG,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_104994.1 | |tss_id=hg_104994.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 21:16, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 7870 |
|---|---|
| Nearest PromoterID: | NM_001204880 |
| Entrez ID: | 7321 |
| Nearest Unigene: | Hs.129683 |
| Nearest Refseq: | NM_003338 |
| Nearest Ensembl: | ENSG00000072401 |
| Gene Name: | UBE2D1 |
| Gene Alias: | E2(17)KB1 |
| Gene Description: | ubiquitin conjugating enzyme E2 D1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-57(CCTTTTAAATTG,+,0.00)" |
