Difference between revisions of "TSS:Hg 104999.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=-5 |entrez_id=7019 |gc_percent=0.716418 |gene_alias=MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3 |gene_description="transcript...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MTTF1= | ||
| + | |MTTFA= | ||
| + | |TCF6= | ||
| + | |TCF6L1= | ||
| + | |TCF6L2= | ||
| + | |TCF6L3= | ||
| + | |all_trans=NM_003201:0 NM_001270782:0 NR_073073:0 ENST00000487519.5:-111 uc001jkf.5:-111 ENST00000373899.3:202 uc001jkg.5:202 BC029815:202 AK312558:262 M62810:273 ENST00000373895.7:291 uc031pve.2:291 BC018628:291 BC104482:295 BC126366:317 EU279428:377 HQ258758:399 KJ897655:399 AB451366:405 AB464302:405 CR407653:405 BT019658:405 BT019659:405 AB451241:405 ENST00000395377.2:461 uc057tjs.1:461 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=0 | ||
|distance_to_tss=-5 | |distance_to_tss=-5 | ||
| + | |end=58385143 | ||
|entrez_id=7019 | |entrez_id=7019 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
|gene_alias=MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3 | |gene_alias=MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3 | ||
|gene_description="transcription factor A, mitochondrial" | |gene_description="transcription factor A, mitochondrial" | ||
| − | |gene_name=TFAM | + | |gene_id=7019 |
| + | |gene_name="transcription factor A, mitochondrial" | ||
| + | |gene_source=HGNC:11741 | ||
| + | |gene_symbol=TFAM | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11741 | ||
|nearest_ensembl=ENSG00000108064 | |nearest_ensembl=ENSG00000108064 | ||
|nearest_promoter_id=NR_073073 | |nearest_promoter_id=NR_073073 | ||
|nearest_refseq=NM_003201 | |nearest_refseq=NM_003201 | ||
|nearest_unigene=Hs.594250 | |nearest_unigene=Hs.594250 | ||
| + | |num_trans=26 | ||
| + | |species=human | ||
| + | |start=58385132 | ||
| + | |strand=+ | ||
| + | |transcript_name=NM_003201 NM_001270782 NR_073073 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104999.1 | |tss_id=hg_104999.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q00059 | ||
}} | }} | ||
Revision as of 21:16, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_003201 NM_001270782 NR_073073 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26 |
| All_trans: | NM_003201:0 NM_001270782:0 NR_073073:0 ENST00000487519.5:-111 uc001jkf.5:-111 ENST00000373899.3:202 uc001jkg.5:202 BC029815:202 AK312558:262 M62810:273 ENST00000373895.7:291 uc031pve.2:291 BC018628:291 BC104482:295 BC126366:317 EU279428:377 HQ258758:399 KJ897655:399 AB451366:405 AB464302:405 CR407653:405 BT019658:405 BT019659:405 AB451241:405 ENST00000395377.2:461 uc057tjs.1:461 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NR_073073 |
| Entrez ID: | 7019 |
| Nearest Unigene: | Hs.594250 |
| Nearest Refseq: | NM_003201 |
| Nearest Ensembl: | ENSG00000108064 |
| Gene Name: | "transcription factor A, mitochondrial" |
| Gene Alias: | MTDPS15 |
| Gene Description: | "transcription factor A, mitochondrial" |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
