Difference between revisions of "TSS:Hg 105008.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=-81 |entrez_id=80114 |gc_percent=0.810945 |gene_alias=BICC|CYSRD |gene_description=BicC family RNA binding protein 1 |gene_name...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |CYSRD= | ||
| + | |all_trans=BC156900:66 ENST00000373886.7:69 uc001jki.2:69 NM_001080512:73 AY726586:127 BC020302:278 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| + | |distance=66 | ||
|distance_to_tss=-81 | |distance_to_tss=-81 | ||
| + | |end=58513071 | ||
|entrez_id=80114 | |entrez_id=80114 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
|gene_alias=BICC|CYSRD | |gene_alias=BICC|CYSRD | ||
|gene_description=BicC family RNA binding protein 1 | |gene_description=BicC family RNA binding protein 1 | ||
| − | |gene_name=BICC1 | + | |gene_id=80114 |
| + | |gene_name=BicC family RNA binding protein 1 | ||
| + | |gene_source=HGNC:19351 | ||
| + | |gene_symbol=BICC1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:19351 | ||
|nearest_ensembl=ENSG00000122870 | |nearest_ensembl=ENSG00000122870 | ||
|nearest_promoter_id=NM_001080512 | |nearest_promoter_id=NM_001080512 | ||
|nearest_refseq=NM_001080512 | |nearest_refseq=NM_001080512 | ||
|nearest_unigene=Hs.100261 | |nearest_unigene=Hs.100261 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=58513054 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC156900 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105008.1 | |tss_id=hg_105008.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:17, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC156900 |
|---|---|
| Distance: | 66 |
| Num_trans: | 6 |
| All_trans: | BC156900:66 ENST00000373886.7:69 uc001jki.2:69 NM_001080512:73 AY726586:127 BC020302:278 |
TATA-Box annotation
| Distance to TSS: | -81 |
|---|---|
| Nearest PromoterID: | NM_001080512 |
| Entrez ID: | 80114 |
| Nearest Unigene: | Hs.100261 |
| Nearest Refseq: | NM_001080512 |
| Nearest Ensembl: | ENSG00000122870 |
| Gene Name: | BicC family RNA binding protein 1 |
| Gene Alias: | BICC |
| Gene Description: | BicC family RNA binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
