Difference between revisions of "TSS:Hg 105014.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=114210 |entrez_id=728640 |gc_percent=0.253731 |gene_alias=- |gene_description="family with sequence similarity 133, member A pseudo...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK130049:-28 | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=-28 | ||
|distance_to_tss=114210 | |distance_to_tss=114210 | ||
| + | |end=58829227 | ||
|entrez_id=728640 | |entrez_id=728640 | ||
|gc_percent=0.253731 | |gc_percent=0.253731 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description="family with sequence similarity 133, member A pseudogene" | |gene_description="family with sequence similarity 133, member A pseudogene" | ||
| − | |gene_name= | + | |gene_id=80114 |
| + | |gene_name=BicC family RNA binding protein 1 | ||
| + | |gene_source=HGNC:19351 | ||
| + | |gene_symbol=BICC1 | ||
| + | |gene_synonyms= | ||
|gene_type=pseudo | |gene_type=pseudo | ||
| + | |hgnc_mgi_id=HGNC:19351 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_027508 | |nearest_promoter_id=NR_027508 | ||
|nearest_refseq=NR_027508 | |nearest_refseq=NR_027508 | ||
|nearest_unigene=Hs.729209 | |nearest_unigene=Hs.729209 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=58829222 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK130049 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105014.1 | |tss_id=hg_105014.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:17, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK130049 |
|---|---|
| Distance: | -28 |
| Num_trans: | 1 |
| All_trans: | AK130049:-28 |
TATA-Box annotation
| Distance to TSS: | 114210 |
|---|---|
| Nearest PromoterID: | NR_027508 |
| Entrez ID: | 728640 |
| Nearest Unigene: | Hs.729209 |
| Nearest Refseq: | NR_027508 |
| Nearest Ensembl: | |
| Gene Name: | BicC family RNA binding protein 1 |
| Gene Alias: | - |
| Gene Description: | "family with sequence similarity 133, member A pseudogene" |
| Gene Type: | pseudo |
| CpG%: | 0 |
| GC%: | 0.253731 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
