Difference between revisions of "TSS:Hg 105019.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=116 |entrez_id=100507008 |gc_percent=0.447761 |gene_alias=- |gene_description=long intergenic non-protein coding RNA 844 |gene_n...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000432535.1:0 uc031wic.2:0 NR_108046:-101 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=0 | ||
|distance_to_tss=116 | |distance_to_tss=116 | ||
| + | |end=58999649 | ||
|entrez_id=100507008 | |entrez_id=100507008 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 844 | |gene_description=long intergenic non-protein coding RNA 844 | ||
| − | |gene_name=LINC00844 | + | |gene_id=100507008 |
| + | |gene_name=long intergenic non-protein coding RNA 844 | ||
| + | |gene_source=HGNC:45031 | ||
| + | |gene_symbol=LINC00844 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:45031 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_108046 | |nearest_promoter_id=NR_108046 | ||
|nearest_refseq=NR_108046 | |nearest_refseq=NR_108046 | ||
|nearest_unigene=Hs.170953 | |nearest_unigene=Hs.170953 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=58999618 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000432535.1 uc031wic.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105019.1 | |tss_id=hg_105019.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:17, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000432535.1 uc031wic.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000432535.1:0 uc031wic.2:0 NR_108046:-101 |
TATA-Box annotation
| Distance to TSS: | 116 |
|---|---|
| Nearest PromoterID: | NR_108046 |
| Entrez ID: | 100507008 |
| Nearest Unigene: | Hs.170953 |
| Nearest Refseq: | NR_108046 |
| Nearest Ensembl: | |
| Gene Name: | long intergenic non-protein coding RNA 844 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 844 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
