Difference between revisions of "TSS:Hg 105023.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=228 |entrez_id=84457 |gc_percent=0.661692 |gene_alias=- |gene_description=phytanoyl-CoA 2-hydroxylase interacting protein like |...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK054956:-27 AB384640:33 AM392743:33 BC011268:-62 ENST00000486074.2:-150 uc057tjx.1:-150 CR749429:-160 ENST00000373880.8:-221 uc001jkk.5:-221 NM_032439:-223 AL834339:-224 ENST00000373878.3:437 uc001jkm.5:437 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| + | |distance=-27 | ||
|distance_to_tss=228 | |distance_to_tss=228 | ||
| + | |end=59176821 | ||
|entrez_id=84457 | |entrez_id=84457 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=phytanoyl-CoA 2-hydroxylase interacting protein like | |gene_description=phytanoyl-CoA 2-hydroxylase interacting protein like | ||
| − | |gene_name=PHYHIPL | + | |gene_id=84457 |
| + | |gene_name=phytanoyl-CoA 2-hydroxylase interacting protein like | ||
| + | |gene_source=HGNC:29378 | ||
| + | |gene_symbol=PHYHIPL | ||
| + | |gene_synonyms=Em:AC025038.1 KIAA1796 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29378 | ||
|nearest_ensembl=ENSG00000165443 | |nearest_ensembl=ENSG00000165443 | ||
|nearest_promoter_id=NM_032439 | |nearest_promoter_id=NM_032439 | ||
|nearest_refseq=NM_032439 | |nearest_refseq=NM_032439 | ||
|nearest_unigene=Hs.499704 | |nearest_unigene=Hs.499704 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=59176810 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK054956 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105023.1 | |tss_id=hg_105023.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:17, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK054956 |
|---|---|
| Distance: | -27 |
| Num_trans: | 13 |
| All_trans: | AK054956:-27 AB384640:33 AM392743:33 BC011268:-62 ENST00000486074.2:-150 uc057tjx.1:-150 CR749429:-160 ENST00000373880.8:-221 uc001jkk.5:-221 NM_032439:-223 AL834339:-224 ENST00000373878.3:437 uc001jkm.5:437 |
TATA-Box annotation
| Distance to TSS: | 228 |
|---|---|
| Nearest PromoterID: | NM_032439 |
| Entrez ID: | 84457 |
| Nearest Unigene: | Hs.499704 |
| Nearest Refseq: | NM_032439 |
| Nearest Ensembl: | ENSG00000165443 |
| Gene Name: | phytanoyl-CoA 2-hydroxylase interacting protein like |
| Gene Alias: | - |
| Gene Description: | phytanoyl-CoA 2-hydroxylase interacting protein like |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
