Difference between revisions of "TSS:Hg 105038.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-89672 |entrez_id=283025 |gc_percent=0.363184 |gene_alias=C10orf40 |gene_description=long intergenic non-protein coding RNA 1553...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000619719.1:77 uc057tlm.1:77 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=77 | ||
|distance_to_tss=-89672 | |distance_to_tss=-89672 | ||
| + | |end=60050591 | ||
|entrez_id=283025 | |entrez_id=283025 | ||
|gc_percent=0.363184 | |gc_percent=0.363184 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_001017982 | |nearest_refseq=NM_001017982 | ||
|nearest_unigene=Hs.522955 | |nearest_unigene=Hs.522955 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=60050578 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000619719.1 uc057tlm.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105038.1 | |tss_id=hg_105038.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 21:18, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000619719.1 uc057tlm.1 |
|---|---|
| Distance: | 77 |
| Num_trans: | 2 |
| All_trans: | ENST00000619719.1:77 uc057tlm.1:77 |
TATA-Box annotation
| Distance to TSS: | -89672 |
|---|---|
| Nearest PromoterID: | NR_024340 |
| Entrez ID: | 283025 |
| Nearest Unigene: | Hs.522955 |
| Nearest Refseq: | NM_001017982 |
| Nearest Ensembl: | ENSG00000235931 |
| Gene Name: | LINC01553 |
| Gene Alias: | C10orf40 |
| Gene Description: | long intergenic non-protein coding RNA 1553 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
