Difference between revisions of "TSS:Hg 105042.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=24 |entrez_id=983 |gc_percent=0.58209 |gene_alias=CDC2|CDC28A|P34CDC2 |gene_description=cyclin dependent kinase 1 |gene_name=CD...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CDC28A= | ||
| + | |P34CDC2= | ||
| + | |all_trans=X05360:0 Y00272:0 ENST00000448257.6:7 uc031pvg.2:7 ENST00000614696.4:10 uc057tmm.1:10 CR933728:10 BC107750:10 ENST00000519760.1:-14 uc057tml.1:-14 ENST00000316629.8:-17 ENST00000395284.7:-17 NM_033379:-17 NM_001170407:-17 NM_001786:-17 uc001jlg.4:-17 uc001jld.3:-17 AK291939:31 ENST00000475504.6:-106 uc057tmk.1:-106 AK295741:-106 ENST00000519078.6:-140 NM_001170406:-140 uc057tmj.1:-140 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=0 | ||
|distance_to_tss=24 | |distance_to_tss=24 | ||
| + | |end=60778486 | ||
|entrez_id=983 | |entrez_id=983 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
|gene_alias=CDC2|CDC28A|P34CDC2 | |gene_alias=CDC2|CDC28A|P34CDC2 | ||
|gene_description=cyclin dependent kinase 1 | |gene_description=cyclin dependent kinase 1 | ||
| − | |gene_name=CDK1 | + | |gene_id=983 |
| + | |gene_name=cyclin-dependent kinase 1 | ||
| + | |gene_source=HGNC:1722 | ||
| + | |gene_symbol=CDK1 | ||
| + | |gene_synonyms=CDC28A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:1722 | ||
|nearest_ensembl=ENSG00000170312 | |nearest_ensembl=ENSG00000170312 | ||
|nearest_promoter_id=NM_033379 | |nearest_promoter_id=NM_033379 | ||
|nearest_refseq=NM_001786 | |nearest_refseq=NM_001786 | ||
|nearest_unigene=Hs.732435 | |nearest_unigene=Hs.732435 | ||
| + | |num_trans=24 | ||
| + | |species=human | ||
| + | |start=60778470 | ||
| + | |strand=+ | ||
| + | |transcript_name=X05360 Y00272 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105042.1 | |tss_id=hg_105042.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:18, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | X05360 Y00272 |
|---|---|
| Distance: | 0 |
| Num_trans: | 24 |
| All_trans: | X05360:0 Y00272:0 ENST00000448257.6:7 uc031pvg.2:7 ENST00000614696.4:10 uc057tmm.1:10 CR933728:10 BC107750:10 ENST00000519760.1:-14 uc057tml.1:-14 ENST00000316629.8:-17 ENST00000395284.7:-17 NM_033379:-17 NM_001170407:-17 NM_001786:-17 uc001jlg.4:-17 uc001jld.3:-17 AK291939:31 ENST00000475504.6:-106 uc057tmk.1:-106 AK295741:-106 ENST00000519078.6:-140 NM_001170406:-140 uc057tmj.1:-140 |
TATA-Box annotation
| Distance to TSS: | 24 |
|---|---|
| Nearest PromoterID: | NM_033379 |
| Entrez ID: | 983 |
| Nearest Unigene: | Hs.732435 |
| Nearest Refseq: | NM_001786 |
| Nearest Ensembl: | ENSG00000170312 |
| Gene Name: | cyclin-dependent kinase 1 |
| Gene Alias: | CDC2 |
| Gene Description: | cyclin dependent kinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
