Difference between revisions of "TSS:Hg 105058.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=53 |entrez_id=84159 |gc_percent=0.427861 |gene_alias=DESRT|MRF-2|MRF2 |gene_description=AT-rich interaction domain 5B |gene_nam...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MRF-2= | ||
| + | |MRF2= | ||
| + | |all_trans=ENST00000279873.11:0 uc001jlt.3:0 NM_032199:-41 AK296921:370 BC107800:379 BC056680:380 AB527389:390 BC156570:390 BC152736:390 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=0 | ||
|distance_to_tss=53 | |distance_to_tss=53 | ||
| + | |end=61901320 | ||
|entrez_id=84159 | |entrez_id=84159 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
|gene_alias=DESRT|MRF-2|MRF2 | |gene_alias=DESRT|MRF-2|MRF2 | ||
|gene_description=AT-rich interaction domain 5B | |gene_description=AT-rich interaction domain 5B | ||
| − | |gene_name=ARID5B | + | |gene_id=84159 |
| + | |gene_name=AT-rich interaction domain 5B | ||
| + | |gene_source=HGNC:17362 | ||
| + | |gene_symbol=ARID5B | ||
| + | |gene_synonyms=FLJ21150 MRF2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17362 | ||
|nearest_ensembl=ENSG00000150347 | |nearest_ensembl=ENSG00000150347 | ||
|nearest_promoter_id=NM_032199 | |nearest_promoter_id=NM_032199 | ||
|nearest_refseq=NM_032199 | |nearest_refseq=NM_032199 | ||
|nearest_unigene=Hs.535297 | |nearest_unigene=Hs.535297 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=61901294 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000279873.11 uc001jlt.3 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105058.1 | |tss_id=hg_105058.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q14865 | ||
}} | }} | ||
Revision as of 21:19, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000279873.11 uc001jlt.3 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000279873.11:0 uc001jlt.3:0 NM_032199:-41 AK296921:370 BC107800:379 BC056680:380 AB527389:390 BC156570:390 BC152736:390 |
TATA-Box annotation
| Distance to TSS: | 53 |
|---|---|
| Nearest PromoterID: | NM_032199 |
| Entrez ID: | 84159 |
| Nearest Unigene: | Hs.535297 |
| Nearest Refseq: | NM_032199 |
| Nearest Ensembl: | ENSG00000150347 |
| Gene Name: | AT-rich interaction domain 5B |
| Gene Alias: | DESRT |
| Gene Description: | AT-rich interaction domain 5B |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
