Difference between revisions of "TSS:Hg 10508.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=1343 |entrez_id=27129 |gc_percent=0.626866 |gene_alias=cvHSP |gene_description=heat shock protein family B (small) member 7 |ge...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000463576.5:-374 uc057cqc.1:-374 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=-374 | ||
|distance_to_tss=1343 | |distance_to_tss=1343 | ||
| + | |end=16017451 | ||
|entrez_id=27129 | |entrez_id=27129 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
|gene_alias=cvHSP | |gene_alias=cvHSP | ||
|gene_description=heat shock protein family B (small) member 7 | |gene_description=heat shock protein family B (small) member 7 | ||
| − | |gene_name=HSPB7 | + | |gene_id=27129 |
| + | |gene_name=heat shock protein family B (small) member 7 | ||
| + | |gene_source=HGNC:5249 | ||
| + | |gene_symbol=HSPB7 | ||
| + | |gene_synonyms=cvHSP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5249 | ||
|nearest_ensembl=ENSG00000173641 | |nearest_ensembl=ENSG00000173641 | ||
|nearest_promoter_id=NM_014424 | |nearest_promoter_id=NM_014424 | ||
|nearest_refseq=NM_014424 | |nearest_refseq=NM_014424 | ||
|nearest_unigene=Hs.502612 | |nearest_unigene=Hs.502612 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=16017442 | ||
| + | |strand=- | ||
|tata_box="30(CCTCATATACAC,+,0.00),73(CCCCAGAAAAGG,-,0.00)" | |tata_box="30(CCTCATATACAC,+,0.00),73(CCCCAGAAAAGG,-,0.00)" | ||
| + | |transcript_name=ENST00000463576.5 uc057cqc.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_10508.1 | |tss_id=hg_10508.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=C9J5A3 | ||
}} | }} | ||
Revision as of 21:20, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000463576.5 uc057cqc.1 |
|---|---|
| Distance: | -374 |
| Num_trans: | 2 |
| All_trans: | ENST00000463576.5:-374 uc057cqc.1:-374 |
TATA-Box annotation
| Distance to TSS: | 1343 |
|---|---|
| Nearest PromoterID: | NM_014424 |
| Entrez ID: | 27129 |
| Nearest Unigene: | Hs.502612 |
| Nearest Refseq: | NM_014424 |
| Nearest Ensembl: | ENSG00000173641 |
| Gene Name: | heat shock protein family B (small) member 7 |
| Gene Alias: | cvHSP |
| Gene Description: | heat shock protein family B (small) member 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "30(CCTCATATACAC,+,0.00),73(CCCCAGAAAAGG,-,0.00)" |
