Difference between revisions of "TSS:Hg 10509.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=834 |entrez_id=27129 |gc_percent=0.686567 |gene_alias=cvHSP |gene_description=heat shock protein family B (small) member 7 |gen...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=EU831930:-1 EU832025:-1 DQ892716:-1 DQ895966:-1 EU176383:-1 KJ898665:-2 AL832181:-27 ENST00000406363.2:-44 uc057cqe.1:-44 AF155908:-70 AJ243191:-70 CR749298:-79 ENST00000411503.5:-80 uc057cqa.1:-80 BX537990:-80 ENST00000442459.2:-82 uc057cqb.1:-82 CR749419:-82 AK075151:-82 AK095911:-82 ENST00000487046.1:-112 uc057cqd.1:-112 ENST00000463576.5:126 uc057cqc.1:126 BC006319:-495 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=-1 | ||
|distance_to_tss=834 | |distance_to_tss=834 | ||
| + | |end=16017961 | ||
|entrez_id=27129 | |entrez_id=27129 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
|gene_alias=cvHSP | |gene_alias=cvHSP | ||
|gene_description=heat shock protein family B (small) member 7 | |gene_description=heat shock protein family B (small) member 7 | ||
| − | |gene_name=HSPB7 | + | |gene_id=27129 |
| + | |gene_name=heat shock protein family B (small) member 7 | ||
| + | |gene_source=HGNC:5249 | ||
| + | |gene_symbol=HSPB7 | ||
| + | |gene_synonyms=cvHSP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5249 | ||
|nearest_ensembl=ENSG00000173641 | |nearest_ensembl=ENSG00000173641 | ||
|nearest_promoter_id=NM_014424 | |nearest_promoter_id=NM_014424 | ||
|nearest_refseq=NM_014424 | |nearest_refseq=NM_014424 | ||
|nearest_unigene=Hs.502612 | |nearest_unigene=Hs.502612 | ||
| + | |num_trans=25 | ||
| + | |species=human | ||
| + | |start=16017950 | ||
| + | |strand=- | ||
| + | |transcript_name=EU831930 EU832025 DQ892716 DQ895966 EU176383 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10509.1 | |tss_id=hg_10509.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:20, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | EU831930 EU832025 DQ892716 DQ895966 EU176383 |
|---|---|
| Distance: | -1 |
| Num_trans: | 25 |
| All_trans: | EU831930:-1 EU832025:-1 DQ892716:-1 DQ895966:-1 EU176383:-1 KJ898665:-2 AL832181:-27 ENST00000406363.2:-44 uc057cqe.1:-44 AF155908:-70 AJ243191:-70 CR749298:-79 ENST00000411503.5:-80 uc057cqa.1:-80 BX537990:-80 ENST00000442459.2:-82 uc057cqb.1:-82 CR749419:-82 AK075151:-82 AK095911:-82 ENST00000487046.1:-112 uc057cqd.1:-112 ENST00000463576.5:126 uc057cqc.1:126 BC006319:-495 |
TATA-Box annotation
| Distance to TSS: | 834 |
|---|---|
| Nearest PromoterID: | NM_014424 |
| Entrez ID: | 27129 |
| Nearest Unigene: | Hs.502612 |
| Nearest Refseq: | NM_014424 |
| Nearest Ensembl: | ENSG00000173641 |
| Gene Name: | heat shock protein family B (small) member 7 |
| Gene Alias: | cvHSP |
| Gene Description: | heat shock protein family B (small) member 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
