Difference between revisions of "TSS:Hg 10516.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=-268 |entrez_id=348487 |gc_percent=0.557214 |gene_alias=C1orf117 |gene_description=family with sequence similarity 131 member C...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000494078.1:267 NM_182623:267 uc057cqk.1:267 ENST00000375662.4:273 uc001axz.5:273 BC016848:273 BC037394:299 AK094085:378 HQ447135:457 KJ900665:457 AB463624:457 CU691488:457 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| + | |distance=267 | ||
|distance_to_tss=-268 | |distance_to_tss=-268 | ||
| + | |end=16073901 | ||
|entrez_id=348487 | |entrez_id=348487 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
|gene_alias=C1orf117 | |gene_alias=C1orf117 | ||
|gene_description=family with sequence similarity 131 member C | |gene_description=family with sequence similarity 131 member C | ||
| − | |gene_name=FAM131C | + | |gene_id=348487 |
| + | |gene_name=family with sequence similarity 131 member C | ||
| + | |gene_source=HGNC:26717 | ||
| + | |gene_symbol=FAM131C | ||
| + | |gene_synonyms=FLJ36766 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26717 | ||
|nearest_ensembl=ENSG00000185519 | |nearest_ensembl=ENSG00000185519 | ||
|nearest_promoter_id=NM_182623 | |nearest_promoter_id=NM_182623 | ||
|nearest_refseq=NM_182623 | |nearest_refseq=NM_182623 | ||
|nearest_unigene=Hs.126825 | |nearest_unigene=Hs.126825 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=16073898 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000494078.1 NM_182623 uc057cqk.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10516.1 | |tss_id=hg_10516.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q96AQ9 | ||
}} | }} | ||
Revision as of 21:23, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000494078.1 NM_182623 uc057cqk.1 |
|---|---|
| Distance: | 267 |
| Num_trans: | 12 |
| All_trans: | ENST00000494078.1:267 NM_182623:267 uc057cqk.1:267 ENST00000375662.4:273 uc001axz.5:273 BC016848:273 BC037394:299 AK094085:378 HQ447135:457 KJ900665:457 AB463624:457 CU691488:457 |
TATA-Box annotation
| Distance to TSS: | -268 |
|---|---|
| Nearest PromoterID: | NM_182623 |
| Entrez ID: | 348487 |
| Nearest Unigene: | Hs.126825 |
| Nearest Refseq: | NM_182623 |
| Nearest Ensembl: | ENSG00000185519 |
| Gene Name: | family with sequence similarity 131 member C |
| Gene Alias: | C1orf117 |
| Gene Description: | family with sequence similarity 131 member C |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
