Difference between revisions of "TSS:Hg 1052.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=10 |entrez_id=101927895 |gc_percent=0.676617 |gene_alias=- |gene_description=uncharacterized LOC101927895 |gene_name=LOC1019278...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NR_135115:0 NR_135114:0 AK096098:0 ENST00000437898.1:92 uc057cvu.1:92 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=0 | ||
|distance_to_tss=10 | |distance_to_tss=10 | ||
| + | |end=19210409 | ||
|entrez_id=101927895 | |entrez_id=101927895 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC101927895 | |gene_description=uncharacterized LOC101927895 | ||
| − | |gene_name=LOC101927895 | + | |gene_id=101927895 284513 |
| + | |gene_name=uncharacterized LOC101927895; uncharacterized LOC284513 | ||
| + | |gene_source=EntrezGene:101927895 EntrezGene:284513 | ||
| + | |gene_symbol=LOC101927895 LOC284513 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000230424 | |nearest_ensembl=ENSG00000230424 | ||
|nearest_promoter_id=NR_135115 | |nearest_promoter_id=NR_135115 | ||
|nearest_refseq=NR_135114 | |nearest_refseq=NR_135114 | ||
|nearest_unigene=Hs.660534 | |nearest_unigene=Hs.660534 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=19210383 | ||
| + | |strand=+ | ||
| + | |transcript_name=NR_135115 NR_135114 AK096098 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_1052.1 | |tss_id=hg_1052.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:25, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NR_135115 NR_135114 AK096098 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | NR_135115:0 NR_135114:0 AK096098:0 ENST00000437898.1:92 uc057cvu.1:92 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NR_135115 |
| Entrez ID: | 101927895 |
| Nearest Unigene: | Hs.660534 |
| Nearest Refseq: | NR_135114 |
| Nearest Ensembl: | ENSG00000230424 |
| Gene Name: | uncharacterized LOC101927895; uncharacterized LOC284513 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101927895 |
| Gene Type: | ncRNA |
| CpG%: | 0.145 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
