Difference between revisions of "TSS:Hg 105204.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-867 |entrez_id=101928913 |gc_percent=0.527363 |gene_alias=- |gene_description=long intergenic non-protein coding RNA 1515 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000608678.5:-16 uc057tof.1:-16 ENST00000620859.4:-39 uc057toe.1:-39 ENST00000599409.5:-50 uc057tod.1:-50 ENST00000601979.5:-100 uc057toc.1:-100 ENST00000433152.8:-214 uc057tob.1:-214 ENST00000593568.1:311 uc057tog.1:311 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-16 | ||
|distance_to_tss=-867 | |distance_to_tss=-867 | ||
| + | |end=65570564 | ||
|entrez_id=101928913 | |entrez_id=101928913 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 1515 | |gene_description=long intergenic non-protein coding RNA 1515 | ||
| − | |gene_name=LINC01515 | + | |gene_id=101928913 |
| + | |gene_name=long intergenic non-protein coding RNA 1515 | ||
| + | |gene_source=HGNC:51210 | ||
| + | |gene_symbol=LINC01515 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:51210 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_120647 | |nearest_promoter_id=NR_120647 | ||
|nearest_refseq=NR_120647 | |nearest_refseq=NR_120647 | ||
|nearest_unigene=Hs.568857 | |nearest_unigene=Hs.568857 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=65570551 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000608678.5 uc057tof.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105204.1 | |tss_id=hg_105204.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:25, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000608678.5 uc057tof.1 |
|---|---|
| Distance: | -16 |
| Num_trans: | 12 |
| All_trans: | ENST00000608678.5:-16 uc057tof.1:-16 ENST00000620859.4:-39 uc057toe.1:-39 ENST00000599409.5:-50 uc057tod.1:-50 ENST00000601979.5:-100 uc057toc.1:-100 ENST00000433152.8:-214 uc057tob.1:-214 ENST00000593568.1:311 uc057tog.1:311 |
TATA-Box annotation
| Distance to TSS: | -867 |
|---|---|
| Nearest PromoterID: | NR_120647 |
| Entrez ID: | 101928913 |
| Nearest Unigene: | Hs.568857 |
| Nearest Refseq: | NR_120647 |
| Nearest Ensembl: | |
| Gene Name: | long intergenic non-protein coding RNA 1515 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1515 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
