Difference between revisions of "TSS:Hg 105218.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-111 |entrez_id=84665 |gc_percent=0.452736 |gene_alias=CMD1DD|CMH22|MYOP|RCM4 |gene_description=myopalladin |gene_name=MYPN |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CMH22= | ||
| + | |MYOP= | ||
| + | |RCM4= | ||
| + | |all_trans=ENST00000540630.5:103 NR_045662:103 NM_001256267:103 uc001jnm.6:103 BX648564:105 BX647640:109 ENST00000354393.6:141 uc001jnn.6:141 AL832379:141 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=103 | ||
|distance_to_tss=-111 | |distance_to_tss=-111 | ||
| + | |end=68106014 | ||
|entrez_id=84665 | |entrez_id=84665 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
|gene_alias=CMD1DD|CMH22|MYOP|RCM4 | |gene_alias=CMD1DD|CMH22|MYOP|RCM4 | ||
|gene_description=myopalladin | |gene_description=myopalladin | ||
| − | |gene_name=MYPN | + | |gene_id=84665 |
| + | |gene_name=myopalladin | ||
| + | |gene_source=HGNC:23246 | ||
| + | |gene_symbol=MYPN | ||
| + | |gene_synonyms=MYOP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23246 | ||
|nearest_ensembl=ENSG00000138347 | |nearest_ensembl=ENSG00000138347 | ||
|nearest_promoter_id=NM_001256267 | |nearest_promoter_id=NM_001256267 | ||
|nearest_refseq=NM_032578 | |nearest_refseq=NM_032578 | ||
|nearest_unigene=Hs.55205 | |nearest_unigene=Hs.55205 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=68105998 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000540630.5 NR_045662 NM_001256267 uc001jnm.6 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105218.1 | |tss_id=hg_105218.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q86TC9 | ||
}} | }} | ||
Revision as of 21:26, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000540630.5 NR_045662 NM_001256267 uc001jnm.6 |
|---|---|
| Distance: | 103 |
| Num_trans: | 9 |
| All_trans: | ENST00000540630.5:103 NR_045662:103 NM_001256267:103 uc001jnm.6:103 BX648564:105 BX647640:109 ENST00000354393.6:141 uc001jnn.6:141 AL832379:141 |
TATA-Box annotation
| Distance to TSS: | -111 |
|---|---|
| Nearest PromoterID: | NM_001256267 |
| Entrez ID: | 84665 |
| Nearest Unigene: | Hs.55205 |
| Nearest Refseq: | NM_032578 |
| Nearest Ensembl: | ENSG00000138347 |
| Gene Name: | myopalladin |
| Gene Alias: | CMD1DD |
| Gene Description: | myopalladin |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
