Difference between revisions of "TSS:Hg 105223.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=93 |entrez_id=84665 |gc_percent=0.467662 |gene_alias=CMD1DD|CMH22|MYOP|RCM4 |gene_description=myopalladin |gene_name=MYPN |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CMH22= | ||
| + | |MYOP= | ||
| + | |RCM4= | ||
| + | |all_trans=AL832002:-9 AL834247:-9 BX647637:-18 ENST00000373675.3:-23 uc001jnp.2:-23 AK027343:-23 BC142609:27 ENST00000613327.4:-86 NM_032578:-86 NR_045663:-86 NM_001256268:-86 uc010qit.4:-86 BC144333:137 BC144334:137 ENST00000358913.9:-282 uc001jno.5:-282 AF328296:-282 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-9 | ||
|distance_to_tss=93 | |distance_to_tss=93 | ||
| + | |end=68109534 | ||
|entrez_id=84665 | |entrez_id=84665 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
|gene_alias=CMD1DD|CMH22|MYOP|RCM4 | |gene_alias=CMD1DD|CMH22|MYOP|RCM4 | ||
|gene_description=myopalladin | |gene_description=myopalladin | ||
| − | |gene_name=MYPN | + | |gene_id=84665 |
| + | |gene_name=myopalladin | ||
| + | |gene_source=HGNC:23246 | ||
| + | |gene_symbol=MYPN | ||
| + | |gene_synonyms=MYOP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23246 | ||
|nearest_ensembl=ENSG00000138347 | |nearest_ensembl=ENSG00000138347 | ||
|nearest_promoter_id=NM_001256268 | |nearest_promoter_id=NM_001256268 | ||
|nearest_refseq=NM_032578 | |nearest_refseq=NM_032578 | ||
|nearest_unigene=Hs.55205 | |nearest_unigene=Hs.55205 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=68109518 | ||
| + | |strand=+ | ||
| + | |transcript_name=AL832002 AL834247 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105223.1 | |tss_id=hg_105223.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:26, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AL832002 AL834247 |
|---|---|
| Distance: | -9 |
| Num_trans: | 17 |
| All_trans: | AL832002:-9 AL834247:-9 BX647637:-18 ENST00000373675.3:-23 uc001jnp.2:-23 AK027343:-23 BC142609:27 ENST00000613327.4:-86 NM_032578:-86 NR_045663:-86 NM_001256268:-86 uc010qit.4:-86 BC144333:137 BC144334:137 ENST00000358913.9:-282 uc001jno.5:-282 AF328296:-282 |
TATA-Box annotation
| Distance to TSS: | 93 |
|---|---|
| Nearest PromoterID: | NM_001256268 |
| Entrez ID: | 84665 |
| Nearest Unigene: | Hs.55205 |
| Nearest Refseq: | NM_032578 |
| Nearest Ensembl: | ENSG00000138347 |
| Gene Name: | myopalladin |
| Gene Alias: | CMD1DD |
| Gene Description: | myopalladin |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
